DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and Slc2a1

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_620182.1 Gene:Slc2a1 / 24778 RGDID:3704 Length:492 Species:Rattus norvegicus


Alignment Length:459 Identity:237/459 - (51%)
Similarity:321/459 - (69%) Gaps:2/459 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LTYSIFSAVLGMLQFGYNTGVINAPEKNIENFMKDVYKDRYGEDISEEFIQQLYSVAVSIFAIGG 77
            |..::..||||.|||||||||||||:|.||.|....:..||||.|....:..|:|::|:||::||
  Rat    12 LMLAVGGAVLGSLQFGYNTGVINAPQKVIEEFYNQTWNHRYGESIPSTTLTTLWSLSVAIFSVGG 76

  Fly    78 MLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSYEMLFLGRFIIGVNCGLNTSLVP 142
            |:|.||.|...|||||:..:|:.|:|....|.||||:|:..|:|||.||||||||.|||.|..||
  Rat    77 MIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVP 141

  Fly   143 MYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLGIEQILGTNEGWPILLGLAICPAILQLILLPV 207
            ||:.|::|..|||.|||::||.:.||:|::||.|::.|:|..:.||:||.:...||:||.||||.
  Rat   142 MYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNADLWPLLLSVIFIPALLQCILLPF 206

  Fly   208 CPESPRYLLITKQWEEEARKALRRLRASGSVEEDIEEMRAEERAQQSESHISTMELICSPTLRPP 272
            ||||||:|||.:..|..|:..|::||.:..|..|::||:.|.|....|..::.:||..||..|.|
  Rat   207 CPESPRFLLINRNEENRAKSVLKKLRGTADVTRDLQEMKEEGRQMMREKKVTILELFRSPAYRQP 271

  Fly   273 LIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKFATIGIGAIMVVMTLVSIPLMDRTGRR 337
            ::|.:|:|||||.||||||||||||:|..:|:  :...:||||.|.:....|:||:.:::|.|||
  Rat   272 ILIAVVLQLSQQLSGINAVFYYSTSIFEKAGV--QQPVYATIGSGIVNTAFTVVSLFVVERAGRR 334

  Fly   338 TLHLYGLGGMFIFSIFITISFLIKEMIDWMSYLSVVATLGFVVFFAVGPGSIPWMITAELFSQGP 402
            ||||.||.||...::.:||:..:.|.:.||||||:||..|||.||.||||.|||.|.||||||||
  Rat   335 TLHLIGLAGMAGCAVLMTIALALLEQLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGP 399

  Fly   403 RPSAMAIAVLVNWMANFVVGIGFPSMKTALENYTFLPFSVFLAIFWIFTYKKVPETKNKTFEEIL 467
            ||:|:|:|...||.:||:||:.|..::.....|.|:.|:|.|.:|:||||.||||||.:||:||.
  Rat   400 RPAAVAVAGFSNWTSNFIVGMCFQYVEQLCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIA 464

  Fly   468 ALFR 471
            :.||
  Rat   465 SGFR 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 222/434 (51%)
Sugar_tr 18..470 CDD:278511 234/451 (52%)
Slc2a1NP_620182.1 MFS_GLUT_Class1 14..458 CDD:340989 230/445 (52%)
Monosaccharide binding. /evidence=ECO:0000250|UniProtKB:P11166 282..288 4/5 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 468..492 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 485 1.000 Domainoid score I377
eggNOG 1 0.900 - - E2759_KOG0569
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D291809at33208
OrthoFinder 1 1.000 - - FOG0000120
OrthoInspector 1 1.000 - - otm45772
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.720

Return to query results.
Submit another query.