DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and F11D5.5

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_508570.4 Gene:F11D5.5 / 184346 WormBaseID:WBGene00017382 Length:382 Species:Caenorhabditis elegans


Alignment Length:385 Identity:85/385 - (22%)
Similarity:159/385 - (41%) Gaps:60/385 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 MYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLGIEQILGTNEGWPILLGLAICPAILQLILLPV 207
            |:|.|.:|.|.||........|..:..|:...:....:|||::.|.:.....:..:.:....:..
 Worm     1 MFIVESSPDNCRGFASAFLIFAFVITKLVMFSVASPNLLGTSQVWFVFPLFGMISSTIVFCFMVQ 65

  Fly   208 CPESPRYLLITKQWEEEARKALRRLRASGSVEEDIEEMRAEERAQQSESHISTMELICSPTLRPP 272
            .||||:: ||.:...|||:.::|..........::.....:|:....::.||..::..:.|||..
 Worm    66 LPESPKW-LIQQDKVEEAKVSIRFYHGKNCTIHEVVTSFIKEKNLTDKNRISLKQIWDNETLREG 129

  Fly   273 LIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKFATIGIGAIMVVMTLVSIP-------L 330
            |.|...:.|..:|........|:..:..|:|.|.:.|.       .|.:::|:.|:|       |
 Worm   130 LKIVFALLLFLEFDTSYVTSVYTIDMHKSAGFTVQQAL-------NINLIITIFSLPTKFFGTFL 187

  Fly   331 MDRTGRRTLH-----LYGLGGMFIFSIFITI-----SFLIKEMIDWMSYLSVVATLGFVVFFAVG 385
            .|..|||.:.     |.......|||:.|||     |:|.:...:.:.:|:.:.:       |.|
 Worm   188 SDSIGRRPIFVIAALLQYFRTCIIFSLEITIYIFGSSWLTRITYNMVEFLAALVS-------ATG 245

  Fly   386 PGSIPWMITAELFSQGPRPSAMAIAVLVNWMANFVVGI----GFPSMKTALENYTFLPFSVFLAI 446
            ..|:..::|.|||.    |||..:......:|:.::|.    .||.:.|......|:||.:...:
 Worm   246 VNSLRLLLTMELFP----PSARTVIGQTQMIASILIGFPILSSFPIINTMFPPIFFVPFVITQLL 306

  Fly   447 FWIFTYKKVPETKNKTFEEILALFRHNNGRSMLNCTNSLEPQSMNSGIEHAALMVSEEKT 506
            ..|:.::.:|||:.:...:|:                    :|::..:...|..:.||.|
 Worm   307 LGIYLFRHMPETRGRAVYDII--------------------ESLDKNVASRATSILEENT 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 76/329 (23%)
Sugar_tr 18..470 CDD:278511 80/347 (23%)
F11D5.5NP_508570.4 Sugar_tr <1..326 CDD:278511 79/343 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0569
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.