DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and LOC101882338

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:XP_005173513.2 Gene:LOC101882338 / 101882338 -ID:- Length:542 Species:Danio rerio


Alignment Length:512 Identity:139/512 - (27%)
Similarity:228/512 - (44%) Gaps:110/512 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 DISEEFIQQLYSVAVSIFAIGGMLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSY 120
            :||..:.:.|.|..|:..|:..:|||...|    .|||:..:|..:.....|..::|   .:.:.
Zfish     9 NISALWQELLVSGTVAAAAVSALLGGCLNG----LFGRRVCILTASFTFAIGGIVLG---SAPNK 66

  Fly   121 EMLFLGRFIIGVNCGLNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLGIEQILGTNE 185
            |.|.:||.|:|:..|:.:..||:||:|.:|.:|||.|.|:|.|.:|.|...:.|:........:|
Zfish    67 EALLVGRLILGLGLGIASMTVPVYIAETSPPHLRGRLVTINTLFITAGQFTASVIDGAFSYMKHE 131

  Fly   186 GWPILLGLAICPAILQLILLPVCPESPRYLLITKQWEEEARKALRRLRASGSVEEDIEEMRA--- 247
            ||..:|||::.||:||.:.....|||||: ||.|...::||:.|.::|.:.:::|:.:.:::   
Zfish   132 GWRYMLGLSVIPALLQFLGFLFLPESPRW-LIQKGLTQKARRVLSQIRGNQNIDEEYDTIKSSIE 195

  Fly   248 -EERAQQSESHISTMELICSPTLRPPLIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKF 311
             ||:....|..: ...::..|..|..||:|..:|:.||.||||.|.|||.::...||:.::....
Zfish   196 EEEKDCGGEGPV-IWRMLTFPPARRALIVGCGLQMFQQLSGINTVMYYSATILQMSGVRDDKLAI 259

  Fly   312 ATIGIGAIM-VVMTLVSIPLMDRTGRRTLHLYGLGGMFIFSIFITISFLIKE------------- 362
            ..:.:.|.. .:.||:.:.|::|.|||.|.|..:.|..:....:::.||:..             
Zfish   260 WLVTVTAFTNFLFTLLGVWLVERVGRRKLTLGSIFGTVLSLCVLSVGFLLSAQHSPPVTLHLSDP 324

  Fly   363 ----------------MID---------------------------------------------- 365
                            |:|                                              
Zfish   325 TTPNSSCAAHLSCEPCMLDPGCGYCYQENSTAVFASSCVPVNPASTERAAWGKCSNSTHLPDSGI 389

  Fly   366 W------MSYLSVVATLGFVVF---FAVGPGSIPWMITAELFSQGPRPSAMAIAVLVNWMANFVV 421
            |      .|| |.|..||.|::   ||.|.|.:||.:.:|::....|.:..|.:..|||..|.:|
Zfish   390 WAYNFCPTSY-SWVVLLGLVLYLASFAPGMGPMPWTVNSEIYPLWARSTGNACSAGVNWTFNVLV 453

  Fly   422 GIGFPSMKTALEN------YTFLPFSVFLAIFWIFTYKKVPETKNKTFEEILALFRH 472
            .:.|..|...|..      ||.|.|:.|     .|.|..:||||.:..|||.:||.:
Zfish   454 SLTFLHMAQYLTYYGVFFLYTSLAFTGF-----FFIYGCLPETKGRRLEEIESLFEN 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 129/490 (26%)
Sugar_tr 18..470 CDD:278511 137/508 (27%)
LOC101882338XP_005173513.2 Sugar_tr 40..503 CDD:331684 127/473 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326501at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.