DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34056 and c1galt1a

DIOPT Version :10

Sequence 1:NP_001033979.1 Gene:CG34056 / 38106 FlyBaseID:FBgn0054056 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_005170092.1 Gene:c1galt1a / 555344 ZFINID:ZDB-GENE-060503-810 Length:316 Species:Danio rerio


Alignment Length:339 Identity:126/339 - (37%)
Similarity:172/339 - (50%) Gaps:49/339 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RNILCLVLGLIIGIQLTDFLEYFQLTDSQFASTSITQLEEGASQLATEEELALWLHNET------ 61
            :|.|.| .|:.:.|.||       :|.|....|..:.....|..::|.:.......|.|      
Zfish     6 QNFLFL-SGVAVSIFLT-------ITYSHVQKTRTSSFVRIARNISTVKHTVAQNRNATLDSSQK 62

  Fly    62 -RVLCMVLTLPKNHQSRVRRVKGTWGRRCNKLIFISSQEDRELGVIDVGVPEDRNNLYLKMRKAL 125
             ||||.|:|.|:|.|||.:.|..|||:||:.:::::| ::.:...|.:.|.|.||.||.|..:|.
Zfish    63 VRVLCWVMTQPQNLQSRTQHVHATWGKRCDTILYMTS-KNTDFPTIGLNVSEGRNQLYWKTIRAF 126

  Fly   126 EYVYRNHGEDYDWFLKADDDTFVIMENLRFLLYPYDPEAALYFGHRFRTTFPQGYMSGGAGYVMS 190
            :|::::|.:|.||||||||||||::||||..|..:..|..||||.|||....|||||||||||:|
Zfish   127 QYIHKHHLDDADWFLKADDDTFVVIENLRHSLSKHSSEDPLYFGRRFRPFVAQGYMSGGAGYVLS 191

  Fly   191 RDALRR-LNLFAFNNSQFCPINNNSEDRQIGFCLQNVGVVAGDSRDEEGRDRFLPLSLKFMLPTF 254
            ::|||| :..||   ...|......||..:|.|::.:.|..|||||..||..|.|         :
Zfish   192 KEALRRFVKGFA---DGLCTHTTELEDVGMGQCMEKMKVEMGDSRDVFGRQVFHP---------Y 244

  Fly   255 PTDNWLPK-----------LTFYEPVNETGSTS--GISFHYVKIHEFEMYEYLLYRLHIFGTPLS 306
            |..|:|.:           ...|.||...|..|  .|||||:...|....||..|.|..:|... 
Zfish   245 PPGNYLVRQLRRQRPWYLIYDHYTPVEGPGCCSDFAISFHYINAVEMHTLEYYTYHLRPYGYKY- 308

  Fly   307 QRTLPPRLGPDELQ 320
                  |..||||:
Zfish   309 ------RFNPDELK 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34056NP_001033979.1 Galactosyl_T 67..>226 CDD:473923 74/159 (47%)
c1galt1aXP_005170092.1 Galactosyl_T <139..>229 CDD:473923 48/92 (52%)

Return to query results.
Submit another query.