DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34056 and fng

DIOPT Version :10

Sequence 1:NP_001033979.1 Gene:CG34056 / 38106 FlyBaseID:FBgn0054056 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_524191.1 Gene:fng / 40314 FlyBaseID:FBgn0011591 Length:412 Species:Drosophila melanogaster


Alignment Length:316 Identity:69/316 - (21%)
Similarity:110/316 - (34%) Gaps:94/316 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SQFASTS-----ITQLEEGASQLATEEELALWLHNETRVLCMVLTLPKNHQSRVRRVKGTWGR-- 87
            ||.|.|:     :|:|::                    :...|.|....|.:|:..:..||.:  
  Fly   132 SQRAVTATPQPPVTELDD--------------------IFISVKTTKNYHDTRLALIIKTWFQLA 176

  Fly    88 RCNKLIFISS-----QEDRELGVIDVGVPED--RNNLYLKMRKALEYVYRNHGEDYDWFLKADDD 145
            |.....|..:     ||..:..:|:....:.  |..|..||...|: |:...|:  .||...|||
  Fly   177 RDQTWFFTDTDDHYYQEKTKGHLINTKCSQGHFRKALCCKMSAELD-VFLESGK--KWFCHFDDD 238

  Fly   146 TFVIMENLRFLLYPYDPEAALYFGH------------------RFRTTFPQGYMSGGAGYVMSRD 192
            .:|.:..|..||..|.|....|.|.                  ..:.||  .:.:||||:.:|| 
  Fly   239 NYVNVPRLVKLLDEYSPSVDWYLGKPSISSPLEIHLDSKNTTTNKKITF--WFATGGAGFCLSR- 300

  Fly   193 ALRRLNLFAFNNSQFCPINNN---SEDRQIGFCLQNVGVVAGDSRDEEGRDRFLPLSLKFMLPTF 254
            ||....|......:|..|.:.   .:|..:||.::::                    ||  :|..
  Fly   301 ALTLKMLPIAGGGKFISIGDKIRFPDDVTMGFIIEHL--------------------LK--VPLT 343

  Fly   255 PTDNWLPKLTFYEPVNETGSTSGISFHY---------VKIHEFEMY--EYLLYRLH 299
            ..||:...|...|.:.:......:||.|         :|:..|:|.  ....|.||
  Fly   344 VVDNFHSHLEPMEFIRQDTFQDQVSFSYAHMKNQWNVIKVDGFDMKTDPKRFYSLH 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34056NP_001033979.1 Galactosyl_T 67..>226 CDD:473923 47/188 (25%)
fngNP_524191.1 Fringe 145..394 CDD:367085 62/296 (21%)

Return to query results.
Submit another query.