DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34056 and c1galt1b

DIOPT Version :9

Sequence 1:NP_001033979.1 Gene:CG34056 / 38106 FlyBaseID:FBgn0054056 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_956345.1 Gene:c1galt1b / 337131 ZFINID:ZDB-GENE-030131-9075 Length:374 Species:Danio rerio


Alignment Length:305 Identity:116/305 - (38%)
Similarity:166/305 - (54%) Gaps:23/305 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EEGASQLATEEELALWLHNETRVLCMVLTLPKNHQSRVRRVKGTWGRRCNKLIFISSQEDRELGV 105
            |:||        ||..|:...|:||.|:|.|.|.:.:.|.||.||.|.||.::||||.::.:...
Zfish    75 EDGA--------LADSLYKRVRILCWVMTGPDNLEKKARHVKATWSRHCNIVVFISSVDNPDFPT 131

  Fly   106 IDVGVPEDRNNLYLKMRKALEYVYRNHGEDYDWFLKADDDTFVIMENLRFLLYPYDPEAALYFGH 170
            :.:...|.|:.||.|..:|..||...|.::.||||||||||:||::|||::|..:.||..:|||.
Zfish   132 VGLNTKEGRDQLYWKTIRAFHYVMEKHSDEADWFLKADDDTYVIVDNLRWILARHSPEDPVYFGR 196

  Fly   171 RFRTTFPQGYMSGGAGYVMSRDALRRLNLFAFNNSQFCPINNNSEDRQIGFCLQNVGVVAGDSRD 235
            ||:....|||||||||||:|::||||. :..| .::.|....:.||..:|.|::.:||.||||||
Zfish   197 RFKPYVKQGYMSGGAGYVLSKEALRRF-VEGF-RTKVCTHTTSVEDLAMGQCMEKIGVKAGDSRD 259

  Fly   236 EEGRDRFLP-LSLKFMLPTFPTDNWLPKLTFYEPVN--ETGSTSGISFHYVKIHEFEMYEYLLYR 297
            ...|:.|.| :....:..|||...|.....:|..|.  :..|...:|||||......:.||..|.
Zfish   260 TMQRETFHPFVPESHLTGTFPKTFWYWNYCYYPIVQGPQCCSDLAVSFHYVDASHMYLLEYYTYH 324

  Fly   298 LHIFGTPLSQRTLPPR---LGPDELQNQLNQW-----AQENSTNS 334
            |..||  ...|..||.   ..|::::.::.:.     |||....|
Zfish   325 LRAFG--YKYRYQPPEPNVKAPEKVETRVLEQKDKVEAQEEENQS 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34056NP_001033979.1 Galactosyl_T 67..>226 CDD:304462 70/158 (44%)
c1galt1bNP_956345.1 Galactosyl_T 107..274 CDD:304462 76/168 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..374 4/13 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579300
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1407357at2759
OrthoFinder 1 1.000 - - FOG0000473
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23033
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.910

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