DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34056 and c1galt1c1

DIOPT Version :9

Sequence 1:NP_001033979.1 Gene:CG34056 / 38106 FlyBaseID:FBgn0054056 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_955961.2 Gene:c1galt1c1 / 324052 ZFINID:ZDB-GENE-030131-2772 Length:317 Species:Danio rerio


Alignment Length:342 Identity:87/342 - (25%)
Similarity:148/342 - (43%) Gaps:71/342 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYRNILCLVLGLIIGIQLTDFLEYFQ-----------------LTDSQFASTSITQLEEGASQLA 48
            ::..|.||::         .|.|.|.                 ::..:....|.:|:.|.|.|: 
Zfish    13 IFGGIFCLIM---------SFFETFNPGTHSEGHNHLHHHLKPVSKDELQKLSESQMSEFAMQV- 67

  Fly    49 TEEELALWLHNETRVLCMVLTLPK--NHQSRVRRVKGTWGRRCNKLIFISSQEDRELGVIDVGVP 111
                         ||.|:::..||  .|.:   ....||.:.|:|.:|.:|:..:.|..:|:...
Zfish    68 -------------RVYCLIMVTPKLLVHWA---TANDTWSKHCDKSVFYTSEASKALDAVDLQEQ 116

  Fly   112 EDRNNLYLKMRKALEYVYRNHGEDYDWFLKADDDTFVIMENLRFLLYPYDPEAALYFGHRFRTTF 176
            ::    :.::|||:::.|.|.| |..||..|...||.|:|||::|:...||....|.||    |.
Zfish   117 DE----WTRLRKAIQHAYENAG-DLHWFFIARPTTFAIIENLKYLVLDKDPSQPFYIGH----TE 172

  Fly   177 PQG---YMSGGAGYVMSRDALRRLNLFAFNNSQFCPINNN-----SEDRQIGFCLQNVGVVAGDS 233
            ..|   |:...:|.|:|.:|:||| :..|.:...||....     ||::|:..||:..||.|.:.
Zfish   173 KSGELDYVEYDSGIVLSYEAMRRL-MEVFKDEDKCPERGRALWKMSEEKQLATCLKYSGVFAENG 236

  Fly   234 RDEEGRDRFLPLSLKFMLPTFPTDNWLPKLTFYEPVNETGSTSGISFHYVKIHEFEMYEYLLYRL 298
            .|.:|:..|...|:..::....:.|  |.    :.|....|...|:|..:...:.::..|.:|||
Zfish   237 EDAQGKGLFNKKSVSSLISDSISQN--PG----DVVEACCSDMAITFAGMSPSQIQVLMYGVYRL 295

  Fly   299 HIFGTPL--SQRTLPPR 313
            ..:|...  |...|||:
Zfish   296 RPYGHDFHDSLTFLPPK 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34056NP_001033979.1 Galactosyl_T 67..>226 CDD:304462 51/168 (30%)
c1galt1c1NP_955961.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2246
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1407357at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23033
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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