DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34056 and C1galt1c1

DIOPT Version :10

Sequence 1:NP_001033979.1 Gene:CG34056 / 38106 FlyBaseID:FBgn0054056 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_001025204.1 Gene:C1galt1c1 / 302499 RGDID:1311230 Length:316 Species:Rattus norvegicus


Alignment Length:323 Identity:92/323 - (28%)
Similarity:155/323 - (47%) Gaps:36/323 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYRNILCLVLGLIIGIQLTDFLEYFQLTDSQFAS-TSITQLEEGASQLATEEELALWLHNETRVL 64
            |..:|.|.::.::..|::.:.:.:.:....|..: ..|.::.|      ||.   :.|....:|.
  Rat    13 MLGSIFCALITMLGHIRIGNRMHHHEHHHLQAPNKDDILKISE------TER---MELSKSFQVY 68

  Fly    65 CMVLTLPKNHQSRVRRVKGTWGRRCNKLIFISSQEDRELGVIDVGVPEDRNNLYLKMRKALEYVY 129
            |:||..||: .|....||.||.:.|:|..|.||:..:....|::    |.|:::|.||||.:|.|
  Rat    69 CIVLVKPKD-VSLWAAVKETWTKHCDKAEFFSSENVKVFESINM----DTNDMWLMMRKAYKYAY 128

  Fly   130 RNHGEDYDWFLKADDDTFVIMENLRFLLYPYDPEAALYFGHRFRTTFPQG---YMSGGAGYVMSR 191
            ..:.:.|:||..|...||.::|||::.|...||....|.||    |...|   |:|...|.|:|.
  Rat   129 DKYKDQYNWFFLARPTTFAVIENLKYFLLRKDPSQPFYLGH----TVKSGDLEYVSVDGGIVLSI 189

  Fly   192 DALRRLNLFAFNNSQFCP-----INNNSEDRQIGFCLQNVGVVAGDSRDEEGRDRFLPLSLKFML 251
            ::::||| ...:..:.||     |...|||:|:..||:..||.|.::.|.:|:|.|...|:...:
  Rat   190 ESMKRLN-GLLSVPEKCPEQGGMIWKISEDKQLAVCLKYAGVFAENAEDADGKDVFNTKSVGLFI 253

  Fly   252 PTFPTDNWLPKLTFYEPVNETGSTSGISFHYVKIHEFEMYEYLLYRLHIFGTPLSQRT--LPP 312
            ....|:.  |.    :.|....|...::|:.:..::..:..|.:|||..||...:...  |||
  Rat   254 KEAMTNQ--PN----QVVEGCCSDMAVTFNGLTPNQMHVMMYGVYRLRAFGHVFNDALVFLPP 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34056NP_001033979.1 Galactosyl_T 67..>226 CDD:473923 58/166 (35%)
C1galt1c1NP_001025204.1 None

Return to query results.
Submit another query.