DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13907 and NFD4

DIOPT Version :10

Sequence 1:NP_612069.1 Gene:CG13907 / 38104 FlyBaseID:FBgn0035173 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_174432.2 Gene:NFD4 / 840037 AraportID:AT1G31470 Length:582 Species:Arabidopsis thaliana


Alignment Length:687 Identity:134/687 - (19%)
Similarity:221/687 - (32%) Gaps:209/687 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 DDDEESVYGELPPPPDGGYG----WVICFASFMCNMIVDGIAYTFGIFLEEFVAYFHEGKGTVAW 118
            ||.|...:.:..||....:|    |.:..|:....      |.|...|  :|.||....|..:. 
plant    20 DDGETKFHRKHLPPLRTMFGRWRKWTVLVAAIWIQ------ASTGTNF--DFSAYSSHLKSVLG- 75

  Fly   119 VGSLLSGVYLSAGPIVSALANKYGCRAVCIAGSIIACIAFVLSTFSTNVSMLMATYGFMGGFGFG 183
                :|.|.|:...:.|.|...:|.      .|.||...|.||.    |....|..||: |:|..
plant    76 ----ISQVRLNYLAVASDLGKAFGW------SSGIALGYFPLSV----VLFAAAAMGFV-GYGVQ 125

  Fly   184 MIYLPAVVAVGYYFETKRSLATGIAVCGSGFGTFAFAPLATYLLEEYGWKNALLIFAGLILNCAI 248
            .:.:..::.:.|.......|..|:::|                     |           .|.|.
plant   126 WLVITNIITLPYSLVFLCCLLAGLSIC---------------------W-----------FNTAC 158

  Fly   249 FGAMMRPLTYPKKKKQKPLMQRMYEEKQLQLE-RGSFAGSHFMVQLPDGTIERKL-KMPLNA-DP 310
            |...:|  .:|             ..:.|.|. ..||.|           |...| .:..|| :|
plant   159 FILCIR--HFP-------------NNRALALSLTVSFNG-----------ISAALYSLAFNAINP 197

  Fly   311 GVHSSLNLELLAQQ-----AGGGGLHPVSTLPTITESKVVDVHRQNGAQSPPNGDSNGQLSARSA 370
               ||.||.||...     .....|:||.|.|::              .:.|:.||         
plant   198 ---SSSNLYLLLNSLVPLVVSFAALYPVLTKPSL--------------DTTPDYDS--------- 236

  Fly   371 AGAVGRRPHRNSESENSPYHSQDAMTRNASQPAFLAGDHQSLPKNGSVPAFNTRV------RKTS 429
                  |.|     ::..:...:.:....|....|:....|..:...:.|....|      ....
plant   237 ------RRH-----DSHVFTILNVLAVITSFHLLLSSSSTSSARLNFIGAVVLLVFPLCAPLLVY 290

  Fly   430 ASERFQPSL-AAIRATSRGDLEAGAGGDFASSKLSLSQRQGGSQTGSS--GRMVR---------P 482
            |.:.|.|.: |.:...|.|.:.... .:..:.|.|:|.:.|....|::  |..||         .
plant   291 ARDYFLPVINARLNHESSGYVMLNI-DELKNQKTSVSSKTGYEHMGTAKEGNTVRLGDEHSFRLL 354

  Fly   483 MSRKDI-------FYSGSV-----TNLPQYQSQKSLANYRNSVLSLTKYEKSMQSVAKLDPLAEA 535
            :||.:.       |..|::     .||.|.  .:||.  :||...:|.| .|.....:|...|..
plant   355 ISRLEFWLYYIAYFCGGTIGLVYSNNLGQI--AQSLG--QNSTTLVTIY-SSFSFFGRLLSAAPD 414

  Fly   536 EKHREEYDLCPCLGIPDSVKSVVNTMLDVSLLKDPV-FMLIGVSN--------IFGMAGLYVPFV 591
            ..|:.             .:........::||..|: |.|:.||:        ...:.||...|:
plant   415 FMHKR-------------FRLTRTGWFAIALLPTPIAFFLLAVSSSQQTALQTATALIGLSSGFI 466

  Fly   592 YLVDAAKEHDIPKNDAAMLLSIIGITN-TVGRVFCGWVADLPQVNSLLLNNCCLLVSTIAVTLTP 655
            :....:...|:...::..:...|.||| .:|.:..|::|            ..:..:..:..:||
plant   467 FAAAVSITSDLFGPNSVGVNHNILITNIPIGSLLYGYIA------------ASIYEANASPDITP 519

  Fly   656 L------CYSYAAYITMSIFFG-LAISGYISLTSIIL 685
            :      |.....|....:|:| |:|.|.:|..|:.:
plant   520 IVSDSIVCIGRDCYFKTFVFWGCLSILGVVSSLSLYI 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13907NP_612069.1 MFS_MCT_SLC16 77..>260 CDD:340910 37/186 (20%)
MFS <566..748 CDD:475125 29/137 (21%)
NFD4NP_174432.2 MFS_Mch1p_like 43..548 CDD:340912 125/654 (19%)

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