DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13907 and zgc:114041

DIOPT Version :9

Sequence 1:NP_001286894.1 Gene:CG13907 / 38104 FlyBaseID:FBgn0035173 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_001025143.1 Gene:zgc:114041 / 574425 ZFINID:ZDB-GENE-050706-122 Length:433 Species:Danio rerio


Alignment Length:669 Identity:122/669 - (18%)
Similarity:204/669 - (30%) Gaps:291/669 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 PPDGGYGWVICFASFMCNMIVDGIAYTFGIFLEEFVAYFHEGKGTVAWVGSLLSGVYLSAGPIVS 135
            |||||||||:..::|....:...:...||:|..|...|:.....|.:.:.|....|:....|:.|
Zfish     8 PPDGGYGWVVVASAFFIMGLTAAVLKNFGLFFLELQNYYSVLTSTTSLMTSTTIAVFHLGSPLAS 72

  Fly   136 ALANKYGCRAVCIAGSIIACIAFVLSTFSTNVSMLMATYGFMGGFGFGMIYLPAVVAVGYYFETK 200
            ||:.....|.|.:.|.::|....::::...::..:..:.|.:.|.|....::||...|.:||:..
Zfish    73 ALSMHLSQRPVIMVGGLLAASGMIIASLGLSLPWMYLSVGVIQGLGVSFTWVPANSMVNHYFKRW 137

  Fly   201 RSLATGIAVCGSGFGTFAFAPLATYLLEEYGWKNALLIFAGLILNCAIFGAMMRPLTYPKKKKQK 265
            |.:|..|:..|......||:|...:|:|.|.|:.|||:..||.||..:.||:|:|          
Zfish   138 RPIACAISSSGECVFGMAFSPFFQWLIESYSWRGALLVIGGLQLNLIVCGALMKP---------- 192

  Fly   266 PLMQRMYEEKQLQLERGSFAGSHFMVQLPDGTIERKLKMPLNADPGVHSSLNLELLAQQAGGGGL 330
                                                                            |
Zfish   193 ----------------------------------------------------------------L 193

  Fly   331 HPVSTLPTITESKVVDVHRQNGAQSPPNGDSNGQLSARSAAGAVGRRPHRNSESENSPYHSQDAM 395
            .||.|                                                            
Zfish   194 QPVQT------------------------------------------------------------ 198

  Fly   396 TRNASQPAFLAGDHQSLPKNGSVPAFNTRVRKTSASERFQPSLAAIRATSRGDLEAGAGGDFASS 460
                                                                           |.
Zfish   199 ---------------------------------------------------------------SR 200

  Fly   461 KLSLSQRQGGSQTGSSGRMVRPMSRKDIFYSGSVTNLPQYQSQKSLANYRNSVLSLTKYEKSMQS 525
            |..|..::|   ||:|.::.                                             
Zfish   201 KAVLDSKEG---TGTSKKVT--------------------------------------------- 217

  Fly   526 VAKLDPLAEAEKHREEYDLCPCLGIPDSVKSVVNTMLDVSLLKDPVFMLIGVSNIFGMAGLYVPF 590
                                                ...||::.|..:|..|..||..||.::|.
Zfish   218 ------------------------------------FQCSLIQRPELLLYIVFAIFAAAGFFIPP 246

  Fly   591 VYLVDAAKEHDIPKNDAAMLLSIIGITNTVGRVFCGWVADLPQVNSLLLNNCCLL--VST---IA 650
            ::||.......:.:..||.|||::.:.:.:||:.|||:|:|     .||.|..||  |:|   :.
Zfish   247 LFLVPYVNNLGMDQYWAASLLSVLSLADLLGRLGCGWLANL-----CLLRNLQLLTMVATAMGVV 306

  Fly   651 VTLTPLCYSYAAYITMSIFFGLAISGYISLTSIILVDLLGLDKLTNAFGLLILFRGFAALIGTPL 715
            :.|.|:.|.|.:.:..:..:|......:::....:||::||:...:|.||.:|.|.....:|.|.
Zfish   307 LLLLPIAYGYWSVLVFTSLYGFLFGCVVAIHVTSIVDIVGLEGFDSALGLFMLLRSIGGFLGPPA 371

  Fly   716 AGAIYDMTHTYDLPFYMAG 734
            ||.:.|.||.:...||::|
Zfish   372 AGWLVDWTHNFGAAFYLSG 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13907NP_001286894.1 MFS 78..>258 CDD:119392 49/179 (27%)
MFS <570..748 CDD:119392 53/170 (31%)
zgc:114041NP_001025143.1 2A0111 15..396 CDD:273323 115/662 (17%)
MFS 18..403 CDD:119392 113/659 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578894
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352338at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.850

Return to query results.
Submit another query.