DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13907 and chk

DIOPT Version :9

Sequence 1:NP_001286894.1 Gene:CG13907 / 38104 FlyBaseID:FBgn0035173 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster


Alignment Length:881 Identity:238/881 - (27%)
Similarity:376/881 - (42%) Gaps:197/881 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GGNSASSARLRRFERTDSELAC--------EEAARLTAEQSPEDEDNQDNDEDDDDEESVYGELP 69
            |...:...|....|..|..:.|        :...||.:.:|          .|..|..|...:.|
  Fly    76 GAGHSRVVRSSVIELEDGTMTCLMNGNGQVKRRKRLISNES----------GDSIDSSSTEKKTP 130

  Fly    70 PPPDGGYGWVICFASFMCNMIVDGIAYTFGIFLEEFVAYFHEGKGTVAWVGSLLSGVYLSAGPIV 134
            ..||||||||:.|||.:.::|.||::::||:...|.:.||.|.....||:.||...|.|..|||.
  Fly   131 KMPDGGYGWVVVFASLVVSLIADGLSFSFGLINVELLEYFGESTSKTAWISSLFFSVPLLMGPIW 195

  Fly   135 SALANKYGCRAVCIAGSIIACIAFVLSTFSTNVSMLMATYGFMGGFGFGMIYLPAVVAVGYYFET 199
            |.|.:|||||.:.|.|.:::...|.||:|..::.|||.|:|.:.|.|.|:.|:.|||::.::|:.
  Fly   196 SNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSIAFWFDK 260

  Fly   200 KRSLATGIAVCGSGFGTFAFAPLATYLLEEYGWKNALLIFAGLILNCAIFGAMMRPLTYPKKKKQ 264
            ||:.||||...|:|.|||.:|.|.:||:|.|||:.|.||..|.:||..:.||:||...:      
  Fly   261 KRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPDW------ 319

  Fly   265 KPLMQRMYEEKQLQLERGS---FAGSHFMVQLPDGTIERKLKMPLNADPGVHSSLNLELLA---- 322
                  :.||.:|:....|   |:.|...::        ::|..|  |.|:.....|:.|.    
  Fly   320 ------LIEENRLESRSQSVTTFSNSSVCLE--------EIKKLL--DTGITKEAVLDSLVTKNN 368

  Fly   323 ----QQAGGGGLHPVST----------LPTITESKVVD------------VHRQNGAQSPPNGDS 361
                ||..    .|:.:          |||...::.:|            :..:.|.::|   ..
  Fly   369 TEANQQID----DPLDSALKRYRSEIFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAP---SR 426

  Fly   362 NGQLSARSAAGA---------------------------------------------VGRRPHRN 381
            ...||..|.|||                                             .||.|:.:
  Fly   427 ENLLSMSSGAGAYPPSTAVIGSPDDTLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGS 491

  Fly   382 SESENSPYHSQ-DAMTRNASQPAFLAGDH-----QSLPKNG----SVPAFNTRVR------KTSA 430
            ..|.:..|.:| .|.:|.:.........|     .:|..||    ||...:..:.      :|.|
  Fly   492 LRSSDEGYLTQKHASSRYSLNENIFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFA 556

  Fly   431 ----SERFQPSLAAI----------RATSRGDLEAGAGGDFASSKLSLSQRQGGSQTG------- 474
                |.|.:|::.||          .||.|..|::..|    ..:||.|::....::.       
  Fly   557 LLEPSRRIRPTVIAIPEQEQSVNSELATRRARLDSITG----IRRLSRSKKPSHHRSNLRRNISI 617

  Fly   475 SSGRMVRPM--SRKDIFYSGSVTNLPQYQSQKSLAN--YRNSVLSLTKYEKSMQSVAKLDPLAEA 535
            .:...::.|  .|..|.|.|::.|..:|:.:.|...  ||||:.::.|.|:...           
  Fly   618 RNSNFLKDMRIHRNSIHYRGAMLNTHRYRLRASSCPNIYRNSMTTIAKEEEDTW----------- 671

  Fly   536 EKHREEYDLCPCLGIPDSVKSVVNTMLDVSLLKDPVFMLIGVSNIFGMAGLYVPFVYLVDAAKEH 600
                  ||     ...|::||:    .|.||..|..|.|..:|.:|......:|::||.|..|::
  Fly   672 ------YD-----NFVDTMKSI----FDFSLFLDMKFALFNLSTLFLFIWFIIPYLYLPDYMKQY 721

  Fly   601 DIPKNDAAMLLSIIGITNTVGRVFCGWVADLPQVNSLLLNNCCLLVSTIAVTLTPLCY-SYAAYI 664
            ....:.:|.|:|.:||..|||.:..|::.||..:|..:..:.|:||...:|...||.. :|...:
  Fly   722 KYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWMNINICYSLCMLVCGASVFFMPLLITNYMGLM 786

  Fly   665 TMSIFFGLAISGYISLTSIILVDLLGLDKLTNAFGLLILFRGFAALIGTPLAGAIYDMTHTYDLP 729
            .|.:.||...:...|.|..|||.::.||..|.|:||::|.:|...:.|.|:||.||:.|..:|..
  Fly   787 VMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPIAGVIYEYTGRWDDT 851

  Fly   730 FYMAGALFGISTITSFLAPCLKRCSPSEETPVHVET 765
            ||.||....:|.:.|:|....::.:|.|.....:||
  Fly   852 FYYAGIFIALSGVCSYLIEFCEKKAPKESDSDVLET 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13907NP_001286894.1 MFS 78..>258 CDD:119392 78/179 (44%)
MFS <570..748 CDD:119392 59/178 (33%)
chkNP_001163063.1 MFS 143..>315 CDD:119392 74/171 (43%)
MFS <685..869 CDD:119392 61/183 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I4618
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 290 1.000 Inparanoid score I2778
Isobase 1 0.950 - 0.919607 Normalized mean entropy S5541
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm8713
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4139
SonicParanoid 1 1.000 - - X70
109.940

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