DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13907 and chk

DIOPT Version :10

Sequence 1:NP_612069.1 Gene:CG13907 / 38104 FlyBaseID:FBgn0035173 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_610230.3 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster


Alignment Length:881 Identity:238/881 - (27%)
Similarity:376/881 - (42%) Gaps:197/881 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GGNSASSARLRRFERTDSELAC--------EEAARLTAEQSPEDEDNQDNDEDDDDEESVYGELP 69
            |...:...|....|..|..:.|        :...||.:.:|          .|..|..|...:.|
  Fly    76 GAGHSRVVRSSVIELEDGTMTCLMNGNGQVKRRKRLISNES----------GDSIDSSSTEKKTP 130

  Fly    70 PPPDGGYGWVICFASFMCNMIVDGIAYTFGIFLEEFVAYFHEGKGTVAWVGSLLSGVYLSAGPIV 134
            ..||||||||:.|||.:.::|.||::::||:...|.:.||.|.....||:.||...|.|..|||.
  Fly   131 KMPDGGYGWVVVFASLVVSLIADGLSFSFGLINVELLEYFGESTSKTAWISSLFFSVPLLMGPIW 195

  Fly   135 SALANKYGCRAVCIAGSIIACIAFVLSTFSTNVSMLMATYGFMGGFGFGMIYLPAVVAVGYYFET 199
            |.|.:|||||.:.|.|.:::...|.||:|..::.|||.|:|.:.|.|.|:.|:.|||::.::|:.
  Fly   196 SNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSIAFWFDK 260

  Fly   200 KRSLATGIAVCGSGFGTFAFAPLATYLLEEYGWKNALLIFAGLILNCAIFGAMMRPLTYPKKKKQ 264
            ||:.||||...|:|.|||.:|.|.:||:|.|||:.|.||..|.:||..:.||:||...:      
  Fly   261 KRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPDW------ 319

  Fly   265 KPLMQRMYEEKQLQLERGS---FAGSHFMVQLPDGTIERKLKMPLNADPGVHSSLNLELLA---- 322
                  :.||.:|:....|   |:.|...::        ::|..|  |.|:.....|:.|.    
  Fly   320 ------LIEENRLESRSQSVTTFSNSSVCLE--------EIKKLL--DTGITKEAVLDSLVTKNN 368

  Fly   323 ----QQAGGGGLHPVST----------LPTITESKVVD------------VHRQNGAQSPPNGDS 361
                ||..    .|:.:          |||...::.:|            :..:.|.::|   ..
  Fly   369 TEANQQID----DPLDSALKRYRSEIFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAP---SR 426

  Fly   362 NGQLSARSAAGA---------------------------------------------VGRRPHRN 381
            ...||..|.|||                                             .||.|:.:
  Fly   427 ENLLSMSSGAGAYPPSTAVIGSPDDTLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGS 491

  Fly   382 SESENSPYHSQ-DAMTRNASQPAFLAGDH-----QSLPKNG----SVPAFNTRVR------KTSA 430
            ..|.:..|.:| .|.:|.:.........|     .:|..||    ||...:..:.      :|.|
  Fly   492 LRSSDEGYLTQKHASSRYSLNENIFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFA 556

  Fly   431 ----SERFQPSLAAI----------RATSRGDLEAGAGGDFASSKLSLSQRQGGSQTG------- 474
                |.|.:|::.||          .||.|..|::..|    ..:||.|::....::.       
  Fly   557 LLEPSRRIRPTVIAIPEQEQSVNSELATRRARLDSITG----IRRLSRSKKPSHHRSNLRRNISI 617

  Fly   475 SSGRMVRPM--SRKDIFYSGSVTNLPQYQSQKSLAN--YRNSVLSLTKYEKSMQSVAKLDPLAEA 535
            .:...::.|  .|..|.|.|::.|..:|:.:.|...  ||||:.::.|.|:...           
  Fly   618 RNSNFLKDMRIHRNSIHYRGAMLNTHRYRLRASSCPNIYRNSMTTIAKEEEDTW----------- 671

  Fly   536 EKHREEYDLCPCLGIPDSVKSVVNTMLDVSLLKDPVFMLIGVSNIFGMAGLYVPFVYLVDAAKEH 600
                  ||     ...|::||:    .|.||..|..|.|..:|.:|......:|::||.|..|::
  Fly   672 ------YD-----NFVDTMKSI----FDFSLFLDMKFALFNLSTLFLFIWFIIPYLYLPDYMKQY 721

  Fly   601 DIPKNDAAMLLSIIGITNTVGRVFCGWVADLPQVNSLLLNNCCLLVSTIAVTLTPLCY-SYAAYI 664
            ....:.:|.|:|.:||..|||.:..|::.||..:|..:..:.|:||...:|...||.. :|...:
  Fly   722 KYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWMNINICYSLCMLVCGASVFFMPLLITNYMGLM 786

  Fly   665 TMSIFFGLAISGYISLTSIILVDLLGLDKLTNAFGLLILFRGFAALIGTPLAGAIYDMTHTYDLP 729
            .|.:.||...:...|.|..|||.::.||..|.|:||::|.:|...:.|.|:||.||:.|..:|..
  Fly   787 VMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPIAGVIYEYTGRWDDT 851

  Fly   730 FYMAGALFGISTITSFLAPCLKRCSPSEETPVHVET 765
            ||.||....:|.:.|:|....::.:|.|.....:||
  Fly   852 FYYAGIFIALSGVCSYLIEFCEKKAPKESDSDVLET 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13907NP_612069.1 MFS_MCT_SLC16 77..>260 CDD:340910 79/182 (43%)
MFS <566..748 CDD:475125 61/182 (34%)
chkNP_610230.3 MFS_MCT_SLC16 138..>315 CDD:340910 77/176 (44%)
MFS <687..869 CDD:475125 60/181 (33%)

Return to query results.
Submit another query.