DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp10 and usp30

DIOPT Version :9

Sequence 1:NP_001261229.1 Gene:Usp10 / 38103 FlyBaseID:FBgn0052479 Length:1517 Species:Drosophila melanogaster
Sequence 2:NP_001039085.1 Gene:usp30 / 733894 XenbaseID:XB-GENE-981069 Length:519 Species:Xenopus tropicalis


Alignment Length:492 Identity:100/492 - (20%)
Similarity:165/492 - (33%) Gaps:165/492 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1111 GLTNRSNYCYINSILQALLGCSPFYNLLRSIPKQAAVLSEVKTPTVNAMMSFMTNFSSLPSGLRL 1175
            ||.|..|.|::||:||.|..|..|...|      |...|:.:          ..|.::....|.:
 Frog    86 GLLNLGNTCFMNSLLQGLASCPSFIRWL------ADFTSKYR----------QENNTTEHQHLSV 134

  Fly  1176 RLNNLNKG-SQSKGKDDFVGSDLQCDMAFEPTEIYKLWNDSREEHVEGRQEDAEEFLGYVLNKLN 1239
            .|.:|.|. ...:|.:|.|   |......|....:: |..|..|     ::||.|....:.:.|.
 Frog   135 TLLHLLKALCNQEGTEDEV---LDASPLLEVLRAHR-WQISSFE-----EQDAHELFHVLTSSLE 190

  Fly  1240 DE---MLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICNNRNKGSVTRQTDFGRTPVSDI---- 1297
            ||   ...|..|.|    ..:.:.|.||:.     |:.|..             :.|:..|    
 Frog   191 DERDRRPHVTHLFD----LDSLEFPLEPQR-----QIHCRT-------------QVPIYPIPSQW 233

  Fly  1298 -----FRGELRSRLQ-REGEHSTDV-IQPFFTLQLNIEKAA-----SVKEALEILVGRDQLEGV- 1349
                 |.|.|.|.:. :..:|.:.: ...|.:|.|:|..|.     ::.:.|:..:..:.::.| 
 Frog   234 KSQHPFHGRLTSNMVCKHCQHQSPMRYDTFDSLSLSIPVATWGHPITLDQCLQHFISTESVKDVV 298

  Fly  1350 --------------TGSKTKQEVVAWQQMTLEKLPVVLILHLK---------------------- 1378
                          :.|...::....:|:.|.|||..|.:||:                      
 Frog   299 CENCTKIHAAQIPNSQSVENRKTTFVKQLKLGKLPQCLCIHLQRLSWSNQGSPLKRNEHVQFSEF 363

  Fly  1379 ----YFDYRSDGCT---KILKKVDFPVELKIDAK-----------ILGSKKTS------------ 1413
                .|.||..||:   :....:....:...|.|           :.|:..||            
 Frog   364 LAMDRFKYRISGCSTSKQPANHLSAAEQETTDGKEGGAQNPTMPFLNGACSTSYISPPFTSPLPT 428

  Fly  1414 -----QKQRAYRLFAVVYHDGKEASKGHYITDVFHTGY-------------SSWLRYDDSSVKPV 1460
                 .....:||.|||.|.| :...||::|      |             ..||...|.:|:..
 Frog   429 NPEWTSSSYLFRLMAVVVHHG-DMHSGHFVT------YRRSPAAKNQKLTSQQWLWISDDTVRRT 486

  Fly  1461 SEKHVLQPHTPRVPYLLYYRR--SDTLPPQQQQTQQQ 1495
            :.:.||....    |||:|.|  |:...|:.|:..::
 Frog   487 NFQEVLSSSA----YLLFYERIQSNLHHPEDQRAAEK 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp10NP_001261229.1 UCH 1109..1479 CDD:278850 95/472 (20%)
Peptidase_C19 1223..1480 CDD:239072 67/360 (19%)
usp30NP_001039085.1 Peptidase_C19F 86..502 CDD:239127 95/473 (20%)
UCH 86..501 CDD:278850 95/472 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 379..405 2/25 (8%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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