DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp10 and nelfa

DIOPT Version :10

Sequence 1:NP_728554.1 Gene:Usp10 / 38103 FlyBaseID:FBgn0052479 Length:1517 Species:Drosophila melanogaster
Sequence 2:XP_068078424.1 Gene:nelfa / 559677 ZFINID:ZDB-GENE-030131-6400 Length:543 Species:Danio rerio


Alignment Length:337 Identity:68/337 - (20%)
Similarity:103/337 - (30%) Gaps:91/337 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   805 PQVRNYGTMKMPSSPV----AWTAPTPERKNSQQAAAAPAAATASAAPVAITTVTTSTASI---- 861
            |.::::...:.|.|..    .....|...:..::.|..|..:........|.| ||....|    
Zfish   159 PPIKHFQLKRKPKSATLRAELLQKSTETAQQLKKTAGVPFHSKGRGLVKKIDT-TTPLKGIPKAP 222

  Fly   862 ---TATPNQFQPETGSSSASPAVAAAQQQQPA----------------AQQHAQAAQTGAAAAPS 907
               ..||:.|.|.:..:..:||....::::..                |::..:...|.|....:
Zfish   223 FRSPTTPSMFSPPSNRTPIAPARTPLRKERGVKLLDISELDMVGAGREAKRRRKTLDTEAGEKAA 287

  Fly   908 KSHS----------------------NYASSKKHQSYEPVVLSSVVATS---------------- 934
            |..:                      |..|:....||.|...|.|.::|                
Zfish   288 KEEAVVENATPDYAAGLVSTQKLGALNNESALPSTSYLPATPSMVPSSSYIPSSETQPANAGGSG 352

  Fly   935 -SSANPQPQLNLAPPAPPASQNSSDSSQLSWASLFASNKPVAKVAPYEASKIAQQQPSHPVLQLA 998
             .:.|.|.:.:.||.|..||....          |....|:     |.||..:...|:.|....:
Zfish   353 RETTNRQSEESAAPSAAAASLPGQ----------FKQRPPM-----YNASTASPTAPTSPTTPTS 402

  Fly   999 PPQPAQVAAAAPVAQLSSPPQNLPLPTAHQQSQLPAPVPAPTAPLVTPGALSYSAASAQAVPAPS 1063
            .|.......||..||...|.|  |..||.|    |||.|||  |...| ..:.|....|...|..
Zfish   403 TPTNNGPPPAATAAQPDMPTQ--PPTTAAQ----PAPTPAP--PQTQP-KKNLSLTREQMYAAQE 458

  Fly  1064 PASASVKPLKPE 1075
            ....:.|..:||
Zfish   459 MFKTANKVTRPE 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp10NP_728554.1 UCH 1110..1479 CDD:425685
nelfaXP_068078424.1 None
Blue background indicates that the domain is not in the aligned region.

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