DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp10 and Usp47

DIOPT Version :10

Sequence 1:NP_728554.1 Gene:Usp10 / 38103 FlyBaseID:FBgn0052479 Length:1517 Species:Drosophila melanogaster
Sequence 2:NP_523937.2 Gene:Usp47 / 38644 FlyBaseID:FBgn0016756 Length:1556 Species:Drosophila melanogaster


Alignment Length:855 Identity:164/855 - (19%)
Similarity:278/855 - (32%) Gaps:309/855 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   804 QPQVRNYGTMKMPSSPVAWTAPTPER--------------KNSQQAAAAPAA------------- 841
            :||::|: .:.:||.  :|.....:|              |:..:.|.:||.             
  Fly    81 EPQLKNH-LILLPSG--SWDGDVTKRFELPIKRVVVKKVMKSDGEKAKSPATGEKKKRVVGEKTK 142

  Fly   842 ---ATASAAPVAITTVTTSTASITATPNQFQPETGSSSASPAVAAAQQQQPAAQQHAQAAQTGAA 903
               |:.|::|....|.:..:.:.|:..::..||..|...:.|              |:.::.|:.
  Fly   143 KKPASGSSSPSKAKTTSEDSLAKTSISSESSPEKTSKIKTTA--------------AKISKPGSE 193

  Fly   904 AAPSKSH------SNYASSKKHQSYEPVVLSSVVATSSSANPQPQLNLAPPAPPASQNSSDSSQL 962
            .||..|.      |...:||...|..||...:...||     :|.|.|..|..|:|         
  Fly   194 KAPRASPEECPELSTEINSKNTSSESPVAKKTAKVTS-----KPTLELLSPIKPSS--------- 244

  Fly   963 SWASLFASNKPVAKVAPYEASKIAQQQPSHPVLQLAPPQPAQVAAAAPVAQLSSPPQNLPLPTAH 1027
                      |:.::.......:::||.|.. |||. ||...:     ::.:...|.:|.:..|.
  Fly   245 ----------PIKELDCEPVDTLSKQQLSEQ-LQLY-PQGRNL-----ISPVDDAPSDLFISDAE 292

  Fly  1028 QQSQLPAPVPAPTAPLVTPGALSYSAASAQA-------VPAPS---------PASASVKPLKPEP 1076
            |.|.....:.|..:|.:......|.|.:..:       |..||         ||.::....|.. 
  Fly   293 QLSDDDLALGASASPTMLGPGYDYGAPTGDSDVEGVTGVTDPSTIGTDDGTYPALSNFYRRKYG- 356

  Fly  1077 PRPVQQQLDEW---TSKYAEYL----TRHKTNLASISLRPR---GLTNRSNYCYINSILQALLGC 1131
                ..:|..|   .:..|:::    |..:......||.||   ||.|::..||:||:||||...
  Fly   357 ----GDELRAWQRVNTTGADFVSSATTETEAEARQASLGPRGYVGLVNQAMTCYLNSLLQALFMT 417

  Fly  1132 SPFYNLL-----------RSIPKQAAVLSEVKTPTVNAMMSFMTNFSSLPSGLRLRLNNLNKGSQ 1185
            ..|.|.|           ::||.|              :.....|..:.|.. .:...:|.:...
  Fly   418 PEFRNALYRWEFDNDNEAKNIPYQ--------------LQKLFLNLQTSPKA-AVETTDLTRSFG 467

  Fly  1186 SKGKDDFVGSDLQ--CDMAFEPTEIYKLWNDSREEHVEGRQEDAEEFLGYVLNKLNDEMLEVIKL 1248
            ....:.:...|:|  |.:.|:..| :|..|..:...:....|          .|:||    .:|.
  Fly   468 WDSTEAWQQHDIQELCRVMFDALE-HKFKNTKQANLISNLYE----------GKMND----YVKC 517

  Fly  1249 IDKPTPQQNGQEPAEPEDGGDVWQMICNNRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHS 1313
            ::                        ||...    ||:..|...|:.                  
  Fly   518 LE------------------------CNTEK----TREDTFLDIPLP------------------ 536

  Fly  1314 TDVIQPFFTLQLNIEKAASVKEALEILVGRDQLEG---VTGSKTKQEVVAWQQMTLEKLPVVLIL 1375
               ::||.    :.....|::|||...|..:.|:|   ....|.|::..|.:.:..:..|.:|.|
  Fly   537 ---VRPFG----SSSAYGSIEEALRAFVQPETLDGNNQYLCEKCKKKCDAHKGLHFKSFPYILTL 594

  Fly  1376 HLKY--FDYRSDGCTKILKKVDFPVELKI------------------------------------ 1402
            |||.  |||::....|:..:|.||..|.:                                    
  Fly   595 HLKRFDFDYQTMHRIKLNDRVTFPQTLNLNTFINRSGNSGEQNSQLNGTVDDCSTADSGSAMEDD 659

  Fly  1403 ----------------------DAKILGSKKTSQKQR------AYRLFAVVYHDGKEASKGHYIT 1439
                                  |..|..|..||:..:      .|.|||::.|.| .||.|||..
  Fly   660 NLSSGVVTTASSSQHENDLNDEDEGIDMSSSTSKSAKQGSGPYLYELFAIMIHSG-SASGGHYYA 723

  Fly  1440 DVFHTGYSSWLRYDDSSVKPVSEKHVLQPHTPRVPYLLYYRRSDTLPPQQQQTQQQNGGGSGGVV 1504
            .:.....:.|..::|.:|..::                           |:..|:..||.:|...
  Fly   724 YIKDFDNNEWFCFNDQNVTSIT---------------------------QEDIQRSFGGPNGSYY 761

  Fly  1505 GSS-SSSSNA 1513
            .|: :||:||
  Fly   762 SSAYTSSTNA 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp10NP_728554.1 UCH 1110..1479 CDD:425685 84/453 (19%)
Usp47NP_523937.2 DUF4045 <122..249 CDD:433066 32/164 (20%)
peptidase_C19C 394..780 CDD:239124 93/489 (19%)
USP47_C 1300..1534 CDD:466158
Blue background indicates that the domain is not in the aligned region.

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