DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp10 and USP50

DIOPT Version :9

Sequence 1:NP_001261229.1 Gene:Usp10 / 38103 FlyBaseID:FBgn0052479 Length:1517 Species:Drosophila melanogaster
Sequence 2:NP_987090.2 Gene:USP50 / 373509 HGNCID:20079 Length:334 Species:Homo sapiens


Alignment Length:339 Identity:77/339 - (22%)
Similarity:129/339 - (38%) Gaps:72/339 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1111 GLTNRSNYCYINSILQALLGCSPFYNLLRSIPKQAAVLSEVKTPTVNAMMSFMTNFSSLPSGLRL 1175
            ||.|..|.|.:|:|.|.|....|.....        :..:..|...|......|.|:.|.:.:.|
Human    45 GLWNLGNTCCVNAISQCLCSILPLVEYF--------LTGKYITALQNDCSEVATAFAYLMTDMWL 101

  Fly  1176 RLNNLNKGSQSKGKDDFVGSDLQCDMAFEPTEIYKLWN---DSREEHVEGRQEDAEEFLGYVLNK 1237
                        |..|.|..::             .|:   :......:..|:||:|||..|||:
Human   102 ------------GDSDCVSPEI-------------FWSALGNLYPAFTKKMQQDAQEFLICVLNE 141

  Fly  1238 LNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICNNRNKGSVTRQTDFGRTPVSDIFRGEL 1302
            |:    |.:|       :.:.......|.|..  |..|    :..:|.:|..    ::.:|..:|
Human   142 LH----EALK-------KYHYSRRRSYEKGST--QRCC----RKWITTETSI----ITQLFEEQL 185

  Fly  1303 R-SRLQREGEHSTDVIQPF--FTLQLNIEKAASVKEALEILVGRDQLE-----GVTGSKTKQEVV 1359
            . |.:..:.|..|...:.|  |:|.:..:...|:::.|:....:|.|.     ..:..:||||..
Human   186 NYSIVCLKCEKCTYKNEVFTVFSLPIPSKYECSLRDCLQCFFQQDALTWNNEIHCSFCETKQETA 250

  Fly  1360 AWQQMTLEKLPVVLILHLKYFDYRSDGCTKILKKVDFPV-ELKIDAKILGSKKTSQKQRAYRLFA 1423
            .  :.::.|.|.::|.|||.||.:.....|:...:.:|: .|.:...|.   ...:|...|.|.|
Human   251 V--RASISKAPKIIIFHLKRFDIQGTTKRKLRTDIHYPLTNLDLTPYIC---SIFRKYPKYNLCA 310

  Fly  1424 VVYHDGKEASKGHY 1437
            ||.|.| :...|||
Human   311 VVNHFG-DLDGGHY 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp10NP_001261229.1 UCH 1109..1479 CDD:278850 77/339 (23%)
Peptidase_C19 1223..1480 CDD:239072 57/224 (25%)
USP50NP_987090.2 Peptidase_C19R 45..333 CDD:239139 77/339 (23%)
UCH_1 45..326 CDD:290159 77/339 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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