DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp10 and Usp16-45

DIOPT Version :10

Sequence 1:NP_728554.1 Gene:Usp10 / 38103 FlyBaseID:FBgn0052479 Length:1517 Species:Drosophila melanogaster
Sequence 2:NP_572220.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster


Alignment Length:772 Identity:158/772 - (20%)
Similarity:233/772 - (30%) Gaps:298/772 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   817 SSPVAWTAPTP--ERKNSQQ---AAAAPAAATASAAPVAITTVTTSTASITA-TPNQFQPETGSS 875
            |.|||...|.|  .||.|.:   .:::.:...::..|...|..|..:.:.|| :|:.|.....::
  Fly   506 SLPVAVEKPQPPQRRKPSPELSLTSSSSSVTPSTGQPTINTKFTDGSVNFTASSPSFFLHAHEAA 570

  Fly   876 SASP--------------AVAAAQQQQPAA-------------------QQHAQAAQTGAAAAPS 907
            |..|              |..||:::|.::                   |..|..|..||....:
  Fly   571 SLGPSKSQVKKEKERQRKAKRAAKKRQKSSLNLNGNDSGNGNELAESVDQDDASLASLGAGDGQA 635

  Fly   908 KSHSNYASSKKHQSYEPVVLSSVVATSSSANPQPQLNLAPPAPPASQNSSDSSQLSWASLFASNK 972
            .......:.:...|     .:|.|.||..::...:.||.......|.|:..||.   |||.|.:|
  Fly   636 NDGLEQTNGQTEDS-----TTSSVTTSEHSDADVEDNLVEDTAAPSTNNVPSST---ASLTAPSK 692

  Fly   973 PVAKVAPYEASKIAQQQPSHPVLQLAPPQPAQVAAAAPVAQLSSPPQNLPLPTAHQQSQLP--AP 1035
                  .|..|. ...||                   |..:....|:::...:..:.....  |.
  Fly   693 ------TYMDSN-GNAQP-------------------PGEKRDDTPEHMDKDSLEEDENDSGIAT 731

  Fly  1036 VPAPTAPLVTPGALSYSAASAQAVPAPSPASASVKPLKPEPPRPVQQQLDEWTSKYAEYLTRHKT 1100
            .|||||   |..:.|.||.......|.|..|.|...|  |.|                       
  Fly   732 SPAPTA---TNSSTSTSATGNNNSVAGSGLSGSSGAL--EDP----------------------- 768

  Fly  1101 NLASISLRPRGLTNRSNYCYINSILQALLGCSPFYNLLRSIPKQAAVLSEVKTPTVNAMMSFMTN 1165
             ||..||...||:.                            |.|:|:.:|.             
  Fly   769 -LAPASLVTAGLSE----------------------------KGASVIRQVS------------- 791

  Fly  1166 FSSLPSGLRLRLNNLNKGSQSKGKDDFVGSDLQCDMAFEPTEIYKLWNDSREEHVEGRQEDAEEF 1230
                                       ||:                     |:......|||:  
  Fly   792 ---------------------------VGA---------------------EQGASNGTEDAD-- 806

  Fly  1231 LGYVLNKLNDEMLEVIKLIDKP--TPQQNGQEPAEPEDGGDVWQMICNNRNKGSVTRQTDFGRTP 1293
                         ...|.|::|  ||.| .|..|:.:           .|.|...|:......|.
  Fly   807 -------------GEAKAIEQPEKTPSQ-AQAMAQAQ-----------ARTKRVRTQSYSDWSTT 846

  Fly  1294 VSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNIEKAASVKEALEILVGRDQL------EGVTGS 1352
            ::..::.|       :||.|.......||             |:|::.|::::      :.:.||
  Fly   847 IAPRYQCE-------DGECSVQSCLNNFT-------------AVELMTGQNKVGCDSCTQRINGS 891

  Fly  1353 KTKQEVV---AWQQMTLEKLPVVLILHLKYFDYRSDGC--TKILKKVDFPVELKIDAKILGSK-- 1410
            ..|.:.|   |.:|:.:...|.|||||||.|.. ...|  .|:.:.|.:|..|.| |...|||  
  Fly   892 DPKAKSVNTNATKQLLVSSPPAVLILHLKRFQL-GPRCIFRKLTRPVSYPNLLDI-AAFCGSKVK 954

  Fly  1411 -----KTSQKQRAYRLFAVVYHDGKEASKGHYITDV-----FHTGYSSW----------LRYDDS 1455
                 ...||:..|.|:.||.|.|.... |||...|     ...|...|          |..||.
  Fly   955 NLPNIDRKQKKLLYALYGVVEHSGGMYG-GHYTAYVKVRPKVAPGDKRWKFLPHGSKAELDQDDD 1018

  Fly  1456 SVKPVSEKHVLQPHTPRVPYLLYYRRSD------------------TLPPQQQQTQQ 1494
            .:|.:.|  :|.....|..:|.....||                  ..|.::|||||
  Fly  1019 QLKKLEE--LLAKEKAREQHLKVLDDSDDFSNSSSNSSTSDESQTPATPLEEQQTQQ 1073

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp10NP_728554.1 UCH 1110..1479 CDD:425685 80/403 (20%)
Usp16-45NP_572220.1 zf-UBP 108..159 CDD:460464
UBP12 <307..990 CDD:227847 139/685 (20%)
Peptidase_C19 307..>512 CDD:470612 4/5 (80%)
Peptidase_C19K <849..1123 CDD:239132 64/250 (26%)
Blue background indicates that the domain is not in the aligned region.

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