DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp10 and Usp12

DIOPT Version :9

Sequence 1:NP_001261229.1 Gene:Usp10 / 38103 FlyBaseID:FBgn0052479 Length:1517 Species:Drosophila melanogaster
Sequence 2:NP_035799.1 Gene:Usp12 / 22217 MGIID:1270128 Length:370 Species:Mus musculus


Alignment Length:402 Identity:106/402 - (26%)
Similarity:161/402 - (40%) Gaps:100/402 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1111 GLTNRSNYCYINSILQALLGCSPFYNLLRSIPKQAAVLSEVKTPTVNAMMSFMTNFSSL----PS 1171
            ||.|..|.||.||:||||..|.||...:.:...|......:.|...:...|..|....:    |.
Mouse    40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKENLLTCLADLFHSIATQKKKVGVIPPK 104

  Fly  1172 GLRLRLNNLNKGSQSKGKDDFVGSDLQCDMAFEPTEIYKLWNDSREEHVEGRQEDAEEFLGYVLN 1236
            ....||...|                         |::..:          .|:||.|||.|:||
Mouse   105 KFITRLRKEN-------------------------ELFDNY----------MQQDAHEFLNYLLN 134

  Fly  1237 KLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICNNRNKGSVTRQTDFGRTP----VSDI 1297
            .:.|.:.|     ::...:|||:     ...|||     :|.:..|         ||    |.:|
Mouse   135 TIADILQE-----ERKQEKQNGR-----LRNGDV-----DNEDNNS---------TPDPTWVHEI 175

  Fly  1298 FRGELRSR---LQREGEHSTDVIQPFFTLQLNIEKAASVKEALEILVGRDQLEGVTGS------- 1352
            |:|.|.:.   |..|...|.|  :.|..|.:::|:..|:...|.   |....|.:...       
Mouse   176 FQGTLTNETRCLTCETISSKD--EDFLDLSVDVEQNTSITHCLR---GFSNTETLCSEYKYYCEE 235

  Fly  1353 -KTKQEVVAWQQMTLEKLPVVLILHLKYFDYRSD--GCTKILKKVDFPVELKIDAKILGSKKTSQ 1414
             ::|||  |.::|.::|||::|.||||.|.|...  ..||:..:|.||:||::   ...|...:.
Mouse   236 CRSKQE--AHKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL---FNTSGDATN 295

  Fly  1415 KQRAYRLFAVVYHDGKEASKGHYITDVFHTGYSSWLRYDDSSVKPVSEKHVLQ--------PHTP 1471
            ..|.|.|.|||.|.|...::||||..|  ..:..||.:||..|:.:..:.:.:        ....
Mouse   296 PDRMYDLVAVVVHCGSGPNRGHYIAIV--KSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 358

  Fly  1472 RVPYLLYYRRSD 1483
            ...|:|:|:..|
Mouse   359 ESGYILFYQSRD 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp10NP_001261229.1 UCH 1109..1479 CDD:278850 104/396 (26%)
Peptidase_C19 1223..1480 CDD:239072 80/281 (28%)
Usp12NP_035799.1 UCH 38..366 CDD:278850 104/396 (26%)
Peptidase_C19G 40..367 CDD:239128 104/397 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..168 9/40 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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