DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp10 and Usp34

DIOPT Version :9

Sequence 1:NP_001261229.1 Gene:Usp10 / 38103 FlyBaseID:FBgn0052479 Length:1517 Species:Drosophila melanogaster
Sequence 2:XP_006514628.1 Gene:Usp34 / 17847 MGIID:109473 Length:3583 Species:Mus musculus


Alignment Length:445 Identity:89/445 - (20%)
Similarity:154/445 - (34%) Gaps:151/445 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1111 GLTNRSNYCYINSILQALLGCSPFYNLLRSIP--KQAAVLSEVKTPTVNAMMSFMTNFSSLPSGL 1173
            ||||....||:.|.:|.|.          .||  :||     |.|...:..|...|....|....
Mouse  1933 GLTNLGATCYLASTIQQLY----------MIPEARQA-----VFTAKYSEDMKHKTTLLELQKMF 1982

  Fly  1174 RLRLNNLNKGSQSKGKDDFVGSDLQCDMAFEPTEIYKLWNDSREEHVEGRQEDAEEFLGYVLNKL 1238
            ...:.:                  :| .|:.|....|.:...::....|.|:|..||...::.|:
Mouse  1983 TYLMES------------------EC-KAYNPRPFCKTYTMDKQPLNTGEQKDMTEFFTDLITKV 2028

  Fly  1239 NDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICNNRNKGSVTRQTDFGRTPVSDIFRGELR 1303
             :||...:|                                            ..|..:|.|.:.
Mouse  2029 -EEMSPELK--------------------------------------------NTVKSLFGGVIT 2048

  Fly  1304 SR-LQREGEHSTDVIQPFFTLQLNIEKAASVKEALEILVGRDQLEG---VTGSKTKQEVVAWQQM 1364
            :. :..:.||.:...:.|:|::..:....::.|:|:.:..:|.|||   .|.|...::|.|.::.
Mouse  2049 NNVVSLDCEHVSQTAEEFYTVRCQVADMKNIYESLDEVTIKDTLEGDNMYTCSHCGKKVRAEKRA 2113

  Fly  1365 TLEKLPVVLILHLKYFDYRSDGCTKILKKVD----FPVEL----------------KIDAKILGS 1409
            ..:|||  .||......|..:..|.:.:||:    ||:.|                |...|.:|.
Mouse  2114 CFKKLP--RILSFNTMRYTFNMVTMMKEKVNTHFSFPLRLDMTPYTEDFLMGKSDRKEGFKDVGD 2176

  Fly  1410 KKTSQKQRAYRLFAVVYHDGKEASKGHY---ITDVFHT-GY--SSWLRYDDSSVKP--------- 1459
            :....:...|.|..|..|.| .|..|||   |.|:.:. .|  :.|..::|:.|||         
Mouse  2177 RSKDTESYEYDLIGVTVHTG-TADGGHYYSFIRDIVNPHAYKNNKWYLFNDAEVKPFDSAQLASE 2240

  Fly  1460 -------------VSEKHV----LQPHTPRVPYLLYYRRSDTLPPQQQQTQQQNG 1497
                         |::|.:    .:.|:   .|:|:|:|        .:.:::||
Mouse  2241 CFGGEMTTKTYDSVTDKFMDFSFEKTHS---AYMLFYKR--------MEPEEENG 2284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp10NP_001261229.1 UCH 1109..1479 CDD:278850 85/425 (20%)
Peptidase_C19 1223..1480 CDD:239072 62/312 (20%)
Usp34XP_006514628.1 peptidase_C19C 1930..2279 CDD:239124 87/438 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D625455at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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