DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12502 and Tmem200c

DIOPT Version :9

Sequence 1:NP_001286893.1 Gene:CG12502 / 38102 FlyBaseID:FBgn0035171 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_001193590.1 Gene:Tmem200c / 622645 MGIID:3646281 Length:637 Species:Mus musculus


Alignment Length:759 Identity:154/759 - (20%)
Similarity:229/759 - (30%) Gaps:298/759 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KRKHSLGNLRRAHPASGATWNVQVVRGKMSSKCLWHACRALILGLTLMLLGAGMATLGYY----- 71
            |||......|:.        :|.||:||: ..|......|| .|:.::|:|..||.:||:     
Mouse    26 KRKRKAKKRRKN--------DVVVVKGKL-KLCSISGLIAL-CGILVLLVGIAMAVVGYWPKANA 80

  Fly    72 ------ADHLSMGSELR---------GNVTVRVKNDLK--------------------------- 94
                  ...|.:||..|         ||     ||..|                           
Mouse    81 ANRGGSKQLLPVGSSHRIGAISNSSNGN-----KNPAKSHSGTPGGANSSSVGGPWSPPPARSAA 140

  Fly    95 -----------------GF---------HLNNFAYVGPIVMGFGGFIVVASCVMTFEARDSAAKV 133
                             ||         |.:.....||::||.|.|:.:.:..:..|.||...|:
Mouse   141 TSSSSSSSSSSSSSTSVGFFFRIFSGYLHSDKLKVFGPLIMGIGIFLFICANAVLHENRDKKTKI 205

  Fly   134 VPAR-----------LR-------------AGGGGSSKNPSRSNQGS-------SASQRRGMGAQ 167
            :..|           ||             |....|:..|..::.|:       |..|.||:   
Mouse   206 INLRDLYSTVIDVHSLRAKDLAAAAAAAAAAAASSSAAAPGSASHGAAPLNGFLSYVQSRGL--- 267

  Fly   168 YQSSRWDQHFGVFRSSPGDPHQQPQTACISTTHPHQHSHPQQPFDREALTAELVQFSRSLSASNR 232
                         ...||        :|..:.         ..|...|:.|.             
Mouse   268 -------------ELKPG--------SCAGSA---------DAFGAAAMLAR------------- 289

  Fly   233 FCPQWRRLSG----------AGSAPDLSGSHAHANTTNSTNATNHQNPTTTVTTNYYNLLSLNRL 287
              ..|...:|          |||.|||:          |:.....:.|:.|...           
Mouse   290 --GSWPHPTGLDGGSGETQEAGSPPDLA----------SSPRCPREPPSLTEAV----------- 331

  Fly   288 SPLDWELYCSHRRHRRHHHRHSHHHHHHHHKSSSSSVRRVRPVRPGLGAGSQPSGGGGGGGGGGA 352
                :.:|  ..|..|..||.:         :.::.......|......||.|:.....|..|..
Mouse   332 ----YSIY--RERSSRAGHRRT---------TVAAVAAATATVTAAASGGSSPAPCSPTGSWGRQ 381

  Fly   353 GSSSSARIISNSSS----LIQRATRE---------CSLLQPPAASRVYWQASSFDGGSNHPPG-L 403
            .::||  ::.:|.|    |..:..|:         ||..:||...          |..:.|.| |
Mouse   382 STTSS--LVGSSLSAFALLPLQGDRDRDGDSEGASCSWHRPPGER----------GSRDLPRGEL 434

  Fly   404 GMSSGAEKRSERNKRSDTAKRHVLSRQRPIEQEEARDHSRSPLGHRRNSTMSDSSYSGRW--TAR 466
            .:|....:.:|...|..:.:        |.|.|.|:. :|:..|.           .||.  |.|
Mouse   435 DLSLTDLRGAEGGARWASCE--------PGEPEGAKT-ARTARGQ-----------GGRLPRTRR 479

  Fly   467 CASMASR-TSSIESRRVQVDLHSPEVMPKSILRSPKRYSSGPS---ATPSVEKEFRSQLSVCSEP 527
            .|:...| ||.:...|..   .|||..|.|   |.:...||||   ||||:  ..|.:     |.
Mouse   480 YAAWRRRSTSGLPDYRAP---PSPEPPPSS---SAENLDSGPSATAATPSL--PLRPE-----ED 531

  Fly   528 PPPVR------QLSGQSSMEPA-VPEESLDQSEEQ--EETTQPKASYEEITELQHHTSSLPPKKA 583
            .|.||      |...|||.... .|....|.|.|.  :...:.:...|::|:.....||  |:..
Mouse   532 SPRVRRDSHSSQSDDQSSSNKGYTPLREADTSVESVVDVVAKKRLDCEDVTDPSTEHSS--PEGP 594

  Fly   584 RPGFLPLARSEQEEDPRPVANPLYRSNSSRQFYRPKKGVPNERD 627
            .||  | .|:|      |::.....:|..:.|...:...|...|
Mouse   595 SPG--P-TRAE------PLSVQRQFTNKEKLFLISRSHTPGVED 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12502NP_001286893.1 DUF2371 <65..137 CDD:287186 26/144 (18%)
Tmem200cNP_001193590.1 DUF2371 14..209 CDD:287186 41/197 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837244
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4823
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR31815
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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