DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12502 and tmem200a

DIOPT Version :9

Sequence 1:NP_001286893.1 Gene:CG12502 / 38102 FlyBaseID:FBgn0035171 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_001038265.1 Gene:tmem200a / 556369 ZFINID:ZDB-GENE-040724-81 Length:497 Species:Danio rerio


Alignment Length:483 Identity:100/483 - (20%)
Similarity:154/483 - (31%) Gaps:128/483 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 TTKRKHSLGNLRRAHPASGATWNVQVVRGKMSSKCLWHACR-ALILGLTLMLLGAGMATLGYYA- 72
            |||||          |.:    :|.|||||:.   |:.|.. .|:||:.:::.|..||.|||:. 
Zfish    39 TTKRK----------PRA----DVVVVRGKIR---LYSASGFFLVLGVLILMAGIAMAVLGYWPH 86

  Fly    73 --------------DHLSMGSELRGNVTVRVKNDLKGFHLNNFAYVGPIVMGFGGFIVVASCVMT 123
                          :..|.|.|..|::...::..:   |......:||..||.|.||.:.:..:.
Zfish    87 KDQPKAPETKMSANNTQSFGREQAGSIAQFLEQHM---HSEKMKMLGPFTMGIGIFIFICANAIL 148

  Fly   124 FEARDSAAKVVPAR-----------LRAGGGGSSKNPSRSNQGSSASQRR-GMGAQYQSSRWDQH 176
            .|.||...||:..|           ||......:........|.....|. |:.:|:.|......
Zfish   149 HENRDRETKVIHMRDMYSTVIDIHSLRIKEQKCTNGACMGPYGGDTEIRTFGLDSQFASRLAANT 213

  Fly   177 FGVFRSSPGDPHQQPQTACISTTHPHQHSHPQQPFDREALTAELVQFSRSLSASNRFC---PQWR 238
            ...|....||.....:|:...              |.:.|.:|         |...||   |.::
Zfish   214 LMSFSGLDGDVRFSHRTSSAD--------------DDDGLMSE---------ARGGFCLLSPTYK 255

  Fly   239 RLSGA-------GSAPDLSGSHAHANTTNSTNATNHQNPTTTVTTNYYNLLSLNR--LSPLDWEL 294
            ..|..       |...|..|:.....|.:..        :::::.....::.||.  :...|.:.
Zfish   256 DRSECIFGFQDDGRWEDRRGALKKCQTRSIV--------SSSISAFTLPVIKLNNCVIDEPDIDS 312

  Fly   295 YCSHRRHRRHHHRHSHHHHHHHHKSSSSSVRRVRPVRPGLGAGSQPSGGGGGGGGGGAGSSSSAR 359
            ........|.|.|             ..|:..:....|.:....:|.|...........|:||. 
Zfish   313 ITEDLEQSRVHSR-------------PPSMESLTVPVPDIAKAFKPPGVQLLRSNSATESASST- 363

  Fly   360 IISNSSSLIQRATRECSLLQPPAASRVYWQASSFDGGSNHPPGLGMSSGAEKRSERNKRSDTAKR 424
              |:.|||...:| ....|.|.||.:.:...:|....|.|...|.:..|..|.:           
Zfish   364 --SSRSSLSPGST-SGRFLSPGAARKDFGSNNSIHMLSAHSKSLDLERGPTKLT----------- 414

  Fly   425 HVLSRQRPIEQEEARDHSRSPLGHRRNS 452
                     .|.|.|.|...|...|.||
Zfish   415 ---------VQPEQRKHPSWPRLDRSNS 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12502NP_001286893.1 DUF2371 <65..137 CDD:287186 22/86 (26%)
tmem200aNP_001038265.1 DUF2371 16..162 CDD:313415 40/142 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..44 5/14 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 353..385 11/35 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..438 12/54 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580840
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4823
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR31815
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.930

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