DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12502 and TMEM200B

DIOPT Version :9

Sequence 1:NP_001286893.1 Gene:CG12502 / 38102 FlyBaseID:FBgn0035171 Length:738 Species:Drosophila melanogaster
Sequence 2:XP_011539759.1 Gene:TMEM200B / 399474 HGNCID:33785 Length:318 Species:Homo sapiens


Alignment Length:261 Identity:55/261 - (21%)
Similarity:85/261 - (32%) Gaps:91/261 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LGLTLMLLGAGMATLGYYADHLSMGSELRGNVTVRVKNDLK----------GFHLNNFAYVGPIV 108
            ||..::|:|.|:|..||:............|.:....::|:          |.| .....:||::
Human    69 LGALVVLVGMGIAVAGYWPHRAGAPGSRAANASSPQMSELRREGRGGGRAHGPH-ERLRLLGPVI 132

  Fly   109 MGFGGFIVVASCVMTFEARDSAAKVVPARLRAG-------------------------------- 141
            ||.|.|:.:.:..:.:|.||...:    |||.|                                
Human   133 MGVGLFVFICANTLLYENRDLETR----RLRQGVLRAQALRPPDGPGWDCALLPSPGPRSPRAVG 193

  Fly   142 -----------GGGSSKNPS-RSNQGSSASQRRGMGAQYQSSRWDQHFGVFRSSPGDPHQ----- 189
                       ..|:|..|| ||.:...|:.|.|:.|...|..        ...||.|..     
Human   194 CAEPEIWDPSPRRGTSPVPSVRSLRSEPANPRLGLPALLNSYP--------LKGPGLPPPWGPRT 250

  Fly   190 ---------QPQTACISTTHPHQHSHPQQPFDREALTAELVQFSRSLSASNRFCPQWRRLSGAGS 245
                     ||..:||      :||   :..|. .|...|:....:...::|..|:..|||..|.
Human   251 QTGHVIITVQPSGSCI------EHS---KSLDL-GLGELLLGAPAARDCAHRSWPRLDRLSLGGY 305

  Fly   246 A 246
            |
Human   306 A 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12502NP_001286893.1 DUF2371 <65..137 CDD:287186 16/81 (20%)
TMEM200BXP_011539759.1 DUF2371 <61..158 CDD:287186 21/93 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147314
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4823
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR31815
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.930

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