DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12502 and tmem200a

DIOPT Version :9

Sequence 1:NP_001286893.1 Gene:CG12502 / 38102 FlyBaseID:FBgn0035171 Length:738 Species:Drosophila melanogaster
Sequence 2:XP_002936350.1 Gene:tmem200a / 100496117 XenbaseID:XB-GENE-6032775 Length:488 Species:Xenopus tropicalis


Alignment Length:493 Identity:100/493 - (20%)
Similarity:157/493 - (31%) Gaps:187/493 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 NVQVVRGKM---SSKCLWHACRALILGLTLMLLGAGMATLGYYADHLSMGSELRGNVTVRVKND- 92
            :|.:||||:   |....:     ||||:.:.:.|..||.|||:......   |...|||.|... 
 Frog    46 DVVIVRGKIRLYSPSGFF-----LILGVLISVAGIAMAVLGYWPQKEPF---LSSEVTVEVNRTK 102

  Fly    93 --------LKGF----HLNNFAYVGPIVMGFGGFIVVASCVMTFEARDSAAKVV----------- 134
                    :|.|    |......:||..||.|.||.:.:..:..|.||...||:           
 Frog   103 ILEEAGMMVKFFEQHLHSEKMKMLGPFTMGIGIFIFICANAILHENRDKETKVIHMRDIYSTVID 167

  Fly   135 --PARLR---------AGGGGSSKNPSRSNQGSSASQR--------RGMGAQYQSSRWDQHFGVF 180
              ..|::         :|..|.|:  .|.::.|.||:.        .||...|::.         
 Frog   168 IHSTRIKEQKHLNGTFSGFYGESE--FRHSENSCASKLAANTIASFSGMSDSYKNC--------- 221

  Fly   181 RSSPGDPHQQPQTACISTTHPHQHSHPQQPFDREALTAELVQFSRSLSASNRFCPQWRRLSGAGS 245
             ||.||....|                     ||..|           .:|...|  ..:.|:||
 Frog   222 -SSMGDEENLP---------------------RETKT-----------FANLLPP--LLMEGSGS 251

  Fly   246 APDLSGSHAHANTTNSTNATNHQN-PTTTVTTNYYN-----LLSLNR--LSPLDWELYCSHRRHR 302
               :.|...|:|..........:. .|.::.::..|     ::.||.  :...|.:         
 Frog   252 ---VFGIPCHSNKLGDDKCGGSKKCETKSIVSSSINAFTLPVIKLNNCVIDEPDID--------- 304

  Fly   303 RHHHRHSHHHHHHHHKSSSSSVRRVRPVRPGLGAGSQPSGGGGGGGGGGAGSSSSARIISNSSSL 367
                          :.:..|.:...||....:.:.|.|             |....|....:::.
 Frog   305 --------------NITEDSEINNTRPRNMSVDSLSVP-------------SPDITRPFKPTNAP 342

  Fly   368 IQRATRECSLLQP-PAASRVYWQASSFDGGSNHP----PGLG--MSSGAEKRSERNKRSDTAKRH 425
            :   ||..|:::| |               |||.    |..|  :|.||.::...:..|    .|
 Frog   343 L---TRSFSIMEPLP---------------SNHSTTPVPNTGQLLSPGAARKPFGSNTS----LH 385

  Fly   426 VLS-RQRPIE----------QEEARDHSRSPLGHRRNS 452
            :|| ..:.::          |.|.|.|...|...|.||
 Frog   386 ILSAHSKSLDLDRGHSTLTVQAEQRKHPSWPRLDRSNS 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12502NP_001286893.1 DUF2371 <65..137 CDD:287186 25/97 (26%)
tmem200aXP_002936350.1 DUF2371 16..159 CDD:370858 36/120 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR31815
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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