DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr20 and sdk1a

DIOPT Version :9

Sequence 1:NP_612066.1 Gene:dpr20 / 38101 FlyBaseID:FBgn0035170 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_009297968.1 Gene:sdk1a / 558391 ZFINID:ZDB-GENE-081104-374 Length:2245 Species:Danio rerio


Alignment Length:569 Identity:126/569 - (22%)
Similarity:183/569 - (32%) Gaps:211/569 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LNEPAARTRPRTKST--TDATKFSSSRGDLHLDCAVPNLIRLLLLIATIMGSGLVQAKTIYDSVN 65
            ||.||....||.:.|  .|..|...|.   .:...:.|.:.:|...|:..|...|||....:..|
Zfish   231 LNSPAVSCFPRPQVTWFRDGYKIIPSN---RIAITLENQLVVLGTAASDAGRYYVQAVNEKNGEN 292

  Fly    66 MIQSLDALVEPRETTKVPLQTTPATPPTAHAHIHNQVST---LRSSYEDSD---DGVDGDYVIPE 124
                               :|:|:        |:..|:.   .|.|: ||:   |.|....|||.
Zfish   293 -------------------KTSPS--------IYLNVAANKKYRGSH-DSEAPADPVAPVIVIPP 329

  Fly   125 SQTSTVAILDQ---DSSMKGQDMESLSLQAGSGTVSPKSSPDSSGHKK---NASFQQIGSQNVNA 183
            ..|:.||.:.:   :.....:.:|.|||......|...|...|...:.   |.:...:|.....|
Zfish   330 RNTTVVAGISEATLECVANARPVEKLSLVWRRNGVEVASGVGSFSRRLTIINPTSTDVGMYVCEA 394

  Fly   184 LVPATVATTSSGLPSSSNASLATPTEP-----ARNRSTGLVRNSA-VKVDSKH------------ 230
            |:     ..||..|:.:.|.|:....|     .|.:..|.|..|. ::..::.            
Zfish   395 LL-----LDSSVKPAEARAFLSITEAPYFTAEPRRKMMGEVEKSVDIQCQARGVPMPKLEWYKDA 454

  Fly   231 -PLSK------------G------QKTDAPMLNYIFDTF--SSANKHHHHDQRYGPHFEDVQRIG 274
             ||||            |      |.:||.    ||..|  :||.:...|.      :.||..:.
Zfish   455 VPLSKLNNPRYKIISSMGLQVRKLQPSDAG----IFQCFARNSAGEAQVHT------YLDVTSMA 509

  Fly   275 QA-----TNLTVQAGSSIHLNCRISLLQDKTVSWVRHNTQ---------------DEG------- 312
            .|     .::||..|:.....||:|......:.| |.:||               :.|       
Zfish   510 PAFTAPPLDITVTDGAVAAFTCRVSGAPKPAIVW-RRDTQILASGSVQIPRFTLLESGGLQIQPV 573

  Fly   313 --KDNG-------------NALDLLTVGMHTYTGDKRYKMEFQYPNNWRLKITNVKKDDEAIYEC 362
              :|.|             ||...|||...|.....        |.:.|     |.|...||.||
Zfish   574 VLQDTGNYTCYAANSEGAINASASLTVWSRTSISSP--------PTDRR-----VIKGTTAILEC 625

  Fly   363 QISTHPPRVIQINLHVNAPKVMIVDEVGDPLQEKYYEIDSTLQLSCVVRNVAMTSSVVFWKHMDN 427
            . :||.|||                                     .||.|        ||..:.
Zfish   626 G-ATHDPRV-------------------------------------GVRYV--------WKKDEE 644

  Fly   428 ILNYDVTRGGVSVKTELMEDGANSTLSIAKISKTDSGNYTCS-ISEFQN 475
            ::::  :|||   :..|.|    .:|.|::....|.|||||. |||..|
Zfish   645 LVSH--SRGG---RISLQE----GSLHISQTWSGDIGNYTCDVISEAGN 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr20NP_612066.1 IG_like 278..365 CDD:214653 27/123 (22%)
Ig 279..378 CDD:299845 32/135 (24%)
Ig 400..471 CDD:299845 18/71 (25%)
IG_like 402..480 CDD:214653 22/75 (29%)
sdk1aXP_009297968.1 I-set 125..208 CDD:254352
Ig 125..204 CDD:299845
IG_like 222..302 CDD:214653 21/100 (21%)
Ig 236..287 CDD:299845 13/53 (25%)
Ig_3 322..394 CDD:290638 15/71 (21%)
I-set 323..412 CDD:254352 22/93 (24%)
I-set 416..505 CDD:254352 19/98 (19%)
Ig 436..500 CDD:299845 13/67 (19%)
I-set 510..600 CDD:254352 17/90 (19%)
Ig 527..600 CDD:299845 13/73 (18%)
I-set 605..693 CDD:254352 35/148 (24%)
Ig 610..693 CDD:299845 35/135 (26%)
FN3 697..788 CDD:238020
fn3 800..886 CDD:278470
FN3 901..997 CDD:238020
FN3 1002..1090 CDD:238020
FN3 1100..1196 CDD:238020
FN3 1206..1301 CDD:238020
FN3 1308..1397 CDD:238020
FN3 1408..1501 CDD:238020
FN3 1507..1602 CDD:238020
FN3 1616..1722 CDD:238020
FN3 1732..1825 CDD:238020
FN3 1830..1919 CDD:238020
FN3 1931..2021 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.