DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr20 and dpr15

DIOPT Version :9

Sequence 1:NP_612066.1 Gene:dpr20 / 38101 FlyBaseID:FBgn0035170 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_001287299.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster


Alignment Length:610 Identity:121/610 - (19%)
Similarity:177/610 - (29%) Gaps:267/610 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 LSLQAGSGTVSPKSSPDSSGHKKNASFQQIGSQNVNALVPATVATTSSGLPSSSNASLATPT--- 208
            :.|.|..|.....|..:|:|....| ||:..|:. .||:|||.....    :...||...||   
  Fly    17 ICLPAIRGQAEETSILNSNGTNGRA-FQRTQSRR-EALIPATTQMAQ----TLDKASAFRPTMAA 75

  Fly   209 ---EPARNRSTGLVRNSAVKVDSKHPLSKGQKTDAPMLNYIFDTFSSANKHHHHDQRY------- 263
               ..|.|||:   .|.|:...|.:...:.:.|.|...|.|   .|:.|....|..|.       
  Fly    76 ALDAAAPNRSS---NNVAINNISNNGDQRLRLTAALEANLI---MSNRNVQEQHSYRITQDNATS 134

  Fly   264 -------GPHFEDVQRI----GQATNLTV------------------------------------ 281
                   |..|.|...|    ..||..|:                                    
  Fly   135 AASIAPNGTAFGDAPSIPIGVAPATTTTIDPATTTPTTTTRRTTRRPVATTTLKPPPTIDDYQTI 199

  Fly   282 --QAGSSIHLNCRISLLQDKTVSWVRHNTQDEGKDNGNALDLLTVGMHTYTGDKRYKMEFQ-YPN 343
              |||:..:|.|.:..|..|.:||:|..       :|:   :|||...|:..|:|::..|. .|.
  Fly   200 ISQAGTHAYLPCNVKQLVKKPISWLRMR-------DGH---ILTVDQTTFIADQRFQSVFSPNPE 254

  Fly   344 NWRLKITNVKKDDEAIYECQISTHPPRVIQINLHVNAPKVMIVDEVGDPLQEKYYEIDSTLQLSC 408
            .|.|:|..|:..||..||||:||.|.....::|.:..||..::.|     ..::.:..|.::|.|
  Fly   255 RWSLQIKYVQLKDEGTYECQVSTEPKASAIVHLRIVEPKTELIGE-----STRHVKAGSQVKLRC 314

  Fly   409 VVRNVAMTSSVVFWKH------------------------------------------------- 424
            ::.........:.|.:                                                 
  Fly   315 IISQALEPPLFINWFYNQKQIYLHNRRGWRTEIERIDLPAEVPTTSTTTTTTTTTASTTTTTTST 379

  Fly   425 ---------------------------------MDNILNYDVTR----GGVSVKTE------LME 446
                                             :|.|...||:.    .||:|.||      |.|
  Fly   380 TPATPSTTATGSTEGATSSETLNGLVTITRSYILDAISQNDVSELGAAAGVAVATETSTAQLLTE 444

  Fly   447 DGANSTLS--------------------------------------------------------- 454
            ..|.|:.|                                                         
  Fly   445 VEATSSTSGTSTGAGLLASTSAAYAAGAAAGITTAATGDSAATAATTSAWLTTMDAEAATTAATT 509

  Fly   455 --------------------IAKISKTDSGNYTCSISEFQNFTIVVHILNGESFAELHHGGAVGW 499
                                |..:.|.||||||||.|.....|||:|:||||..|.....|:|.|
  Fly   510 TTTMLPSSSFIKQITTASLIIPAVVKLDSGNYTCSPSNSAPRTIVLHVLNGEYSASAIKSGSVSW 574

  Fly   500 HST--------WWNMVMLHAMALLV 516
            .:.        |.|:..|..:..::
  Fly   575 SALIGCHGYLHWRNVSTLLTLLWII 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr20NP_612066.1 IG_like 278..365 CDD:214653 30/125 (24%)
Ig 279..378 CDD:299845 34/137 (25%)
Ig 400..471 CDD:299845 28/239 (12%)
IG_like 402..480 CDD:214653 31/246 (13%)
dpr15NP_001287299.1 IG_like 197..289 CDD:214653 33/101 (33%)
V-set 204..290 CDD:284989 31/95 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444685
Domainoid 1 1.000 42 1.000 Domainoid score I12424
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000207
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23279
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.840

Return to query results.
Submit another query.