DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr20 and sdk

DIOPT Version :9

Sequence 1:NP_612066.1 Gene:dpr20 / 38101 FlyBaseID:FBgn0035170 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster


Alignment Length:281 Identity:54/281 - (19%)
Similarity:108/281 - (38%) Gaps:61/281 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 SSSNASLATPTEPARNRSTGLVRNSAVKVDSKHP---LSKGQKTDAPMLNYIFDTFSSANKHHHH 259
            :|::..|...|:.|:||...|.:...::|.:.|.   ..||.::.:......| .|:||      
  Fly   442 NSASTWLRVKTKTAKNRVKRLAQPRILRVRASHAGLGSEKGSESGSSDRRKEF-RFASA------ 499

  Fly   260 DQRYGPHFEDVQRIGQATNLTVQAGSSIHLNCRISLLQDKTVSWVRHNTQDEGKDNGNALDLLTV 324
                 |..|...:     |:|...|....::||.....:..::|:.:.||        .:|:.:.
  Fly   500 -----PIMELPPQ-----NVTALDGKDATISCRAVGSPNPNITWIYNETQ--------LVDISSR 546

  Fly   325 GMHTYTGDKRYKMEFQYPNNWRLKITNVKKDDEAIYECQISTHPPRVIQINLHVNAPKVMIVDEV 389
            .....:||              |.|:|::..|..:|.| :..:....::...:::   |::..::
  Fly   547 VQILESGD--------------LLISNIRSVDAGLYIC-VRANEAGSVKGEAYLS---VLVRTQI 593

  Fly   390 GDPLQEKYYEIDSTLQLSCVVRNVAMTSSVVFWKHMDNILNYDVTRGGVS----VKTELMEDGAN 450
            ..|..:....:..|..|.|   .|:...||.:        |.|..|.|.|    ..::.:...|:
  Fly   594 IQPPVDTTVLLGLTATLQC---KVSSDPSVPY--------NIDWYREGQSSTPISNSQRIGVQAD 647

  Fly   451 STLSIAKISKTDSGNYTCSIS 471
            ..|.|..:..:|.|:|.|.::
  Fly   648 GQLEIQAVRASDVGSYACVVT 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr20NP_612066.1 IG_like 278..365 CDD:214653 17/86 (20%)
Ig 279..378 CDD:299845 16/98 (16%)
Ig 400..471 CDD:299845 18/74 (24%)
IG_like 402..480 CDD:214653 18/74 (24%)
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653
Ig 280..343 CDD:299845
IG_like 375..450 CDD:214653 2/7 (29%)
Ig 378..447 CDD:143165 1/4 (25%)
Ig 506..587 CDD:299845 17/111 (15%)
IG_like 506..587 CDD:214653 17/111 (15%)
I-set 592..682 CDD:254352 19/88 (22%)
Ig 595..682 CDD:299845 19/85 (22%)
FN3 686..789 CDD:238020
FN3 798..893 CDD:238020
FN3 901..1005 CDD:238020
fn3 1011..1094 CDD:278470
FN3 1108..1202 CDD:238020
FN3 1210..1308 CDD:238020
fn3 1317..1402 CDD:278470
FN3 1415..1507 CDD:238020
FN3 1513..1608 CDD:238020
fn3 1617..1708 CDD:278470
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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