DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr20 and Lrit1

DIOPT Version :9

Sequence 1:NP_612066.1 Gene:dpr20 / 38101 FlyBaseID:FBgn0035170 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_666357.2 Gene:Lrit1 / 239037 MGIID:2385320 Length:624 Species:Mus musculus


Alignment Length:329 Identity:56/329 - (17%)
Similarity:100/329 - (30%) Gaps:127/329 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DCAVPNLIRLLLLIATIMGSGLVQAKTIY--------------------------DSVNMIQSLD 71
            ||.:.:|:.||        .|.|.:..|:                          .|..:...:.
Mouse   206 DCRLYDLVHLL--------DGWVSSNLIFIEARLRCASPRSLAGVAFSQLELRKCQSPELRPGVT 262

  Fly    72 ALVEPRETTKV---------------------PLQTTPATPPTAHAHIHNQVSTLRSSYEDSDDG 115
            :::.|..:|.:                     ||..|          :|.:||:..||:...|..
Mouse   263 SIISPLGSTVLLRCGATGIPGPEMSWRRANGRPLNGT----------VHQEVSSDGSSWTLLDLP 317

  Fly   116 V-----DGDYV------IPESQTSTVAILDQDSSMKGQDMESLSLQAGSGTVSPKSSPDSSGHKK 169
            |     .|||:      :..|:|....|:.:..:..|.          ||......:....|.:.
Mouse   318 VVSLFDSGDYICQAKNFLGASETLISLIVTEPQTSTGY----------SGIPGVLWARTGEGAEA 372

  Fly   170 NASFQQIGSQNVNALVPATVATTSSGLPS------SSNASLATP----TEPARNRSTGLVRNSAV 224
            .|...::.:::|..:.......|...:||      ..|..:..|    .||:.::...:||:..|
Mouse   373 AAYNNKLVARHVPHMPEHVALATKPSMPSIKEELALQNFQMDVPGEFSREPSEHQEAQMVRSLKV 437

  Fly   225 KVDSKHPLS-------KGQKTDAPMLNYIFDTFSSANKHHHHDQRYGPHFEDVQRIGQATNLTVQ 282
            ..|:.|.:|       .|..|...:|..:|.         |.|.|               .:||:
Mouse   438 VGDTYHSVSLVWKAPQAGNTTAFSVLYAVFG---------HRDMR---------------RMTVE 478

  Fly   283 AGSS 286
            .|.:
Mouse   479 PGKT 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr20NP_612066.1 IG_like 278..365 CDD:214653 3/9 (33%)
Ig 279..378 CDD:299845 3/8 (38%)
Ig 400..471 CDD:299845
IG_like 402..480 CDD:214653
Lrit1NP_666357.2 LRRNT 23..61 CDD:214470
LRR 1 60..81
LRR_8 63..143 CDD:290566
leucine-rich repeat 64..84 CDD:275378
LRR 2 84..105
leucine-rich repeat 85..132 CDD:275378
LRR 3 108..129
LRR_8 131..>176 CDD:290566
LRR_4 131..172 CDD:289563
LRR 4 132..153
leucine-rich repeat 133..156 CDD:275378
LRR 5 156..177
leucine-rich repeat 157..180 CDD:275378
leucine-rich repeat 181..205 CDD:275378
TPKR_C2 201..>241 CDD:301599 8/42 (19%)
Ig 258..346 CDD:299845 17/97 (18%)
IG_like 268..346 CDD:214653 16/87 (18%)
FN3 432..502 CDD:214495 16/75 (21%)
LRR 6 526..549
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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