DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr20 and DSCAM

DIOPT Version :9

Sequence 1:NP_612066.1 Gene:dpr20 / 38101 FlyBaseID:FBgn0035170 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_001380.2 Gene:DSCAM / 1826 HGNCID:3039 Length:2012 Species:Homo sapiens


Alignment Length:492 Identity:90/492 - (18%)
Similarity:157/492 - (31%) Gaps:167/492 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LLIATI----MGSGLVQAKTIYDSVNMIQSLDALVEPRETTKVPLQTTPATPPTAHAHIHNQVST 104
            |||..|    .||.:.:....|.:..:|..|        ..|.||:.| .:|....:.:.:||| 
Human   278 LLIENIRPSDSGSYVCEVSNRYGTAKVIGRL--------YVKQPLKAT-ISPRKVKSSVGSQVS- 332

  Fly   105 LRSSYEDSDD---------------------GVDGDYVIPE----SQTSTVAILDQDSSMKGQDM 144
            |..|...::|                     |::.:.:|.:    |.........:...:..||.
Human   333 LSCSVTGTEDQELSWYRNGEILNPGKNVRITGINHENLIMDHMVKSDGGAYQCFVRKDKLSAQDY 397

  Fly   145 ESLSLQAGS---------GTVSPKSSPDSSGHKKNASFQQI------------GSQNVNALVPAT 188
            ..:.|:.|:         ..|||........:.|......|            ||..::.::   
Human   398 VQVVLEDGTPKIISAFSEKVVSPAEPVSLMCNVKGTPLPTITWTLDDDPILKGGSHRISQMI--- 459

  Fly   189 VATTSSGLPSSSNASLATPTEP-----ARNRSTGLVRNSAVKVDSKHPLSKGQKTDAPMLNYIFD 248
              |:...:.|..|.|.:...:.     ..|.|.|:|...| :::.:.|.|               
Human   460 --TSEGNVVSYLNISSSQVRDGGVYRCTANNSAGVVLYQA-RINVRGPAS--------------- 506

  Fly   249 TFSSANKHHHHDQRYGPHFEDVQRIGQATNLTVQAGSSIHLNCRISLLQDKTVSWVRHNTQDEGK 313
                                    |....|:|..||...:::||:......::.|.:        
Human   507 ------------------------IRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYK-------- 539

  Fly   314 DNGNALDLLTVGMHTYTGDKRYKMEFQYPNNWRLKITNVKKD-DEAIYECQISTHPPRVIQINLH 377
             |.|.|..             ...:..:.||..||:::|:|: ||..|.|.:...|......::|
Human   540 -NSNLLPF-------------NHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVH 590

  Fly   378 VNAPKVMIVDEVGDPLQEKYYEIDSTLQLSCVVRNVAMTSSVVFWKH-----------MDNILNY 431
            |...    |.....|.:...:.|...:.:.|||.:..:..::.:.|.           :|||   
Human   591 VTVK----VPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPGSLGVTIDNI--- 648

  Fly   432 DVTRGGVSVKTELMEDGANSTLSIAKISKTDSGNYTC 468
            |.|                |:|.|:.:|...:|||||
Human   649 DFT----------------SSLRISNLSLMHNGNYTC 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr20NP_612066.1 IG_like 278..365 CDD:214653 20/87 (23%)
Ig 279..378 CDD:299845 20/99 (20%)
Ig 400..471 CDD:299845 19/80 (24%)
IG_like 402..480 CDD:214653 18/78 (23%)
DSCAMNP_001380.2 Ig 45..113 CDD:319273
I-set 235..310 CDD:254352 9/39 (23%)
I-set 315..385 CDD:333254 11/71 (15%)
Ig_3 407..488 CDD:316449 11/85 (13%)
IGc2 518..575 CDD:197706 16/78 (21%)
I-set 596..686 CDD:333254 20/93 (22%)
Ig_DSCAM 707..784 CDD:143211
Ig 802..889 CDD:325142
FN3 885..978 CDD:238020
FN3 986..1083 CDD:238020
FN3 1091..1184 CDD:238020
FN3 1189..1278 CDD:238020
Ig 1303..1369 CDD:319273
FN3 1380..1470 CDD:238020
FN3 1486..1555 CDD:238020
Required for netrin-mediated axon repulsion of neuronal growth cones. /evidence=ECO:0000250|UniProtKB:Q9ERC8 1617..2012
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1718..1810
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1855..1883
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1971..2012
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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