DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment dpr20 and rig-5

DIOPT Version :9

Sequence 1:	NP_612066.1	Gene:	dpr20 / 38101	FlyBaseID:	FBgn0035170	Length:	525	Species:	Drosophila melanogaster
Sequence 2:	NP_001251131.1	Gene:	rig-5 / 172791	WormBaseID:	WBGene00004372	Length:	482	Species:	Caenorhabditis elegans

Alignment Length:	206	Identity:	46/206 - (22%)
Similarity:	76/206 - (36%)	Gaps:	53/206 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly   284 GSSIHLNCRISLLQDKTVSWVRHNTQDEGKDNGNALDLLTVGMHTYTGDKRYKMEFQYP------ 342
            |..:...|.::.|....|::|:.::...         ||:.....:....:|:::   |
Worm    99 GQDVDFTCIVNDLGSHMVAFVKADSPPR---------LLSFDEKVFRRRNKYELK---PRIGDLH 151

  Fly   343 NNWRLKITNVKKDDEAIYECQISTHPPRVIQINLHVNAPKVMIVDEVGDPLQEKYYEIDSTLQLS 407
            |.|.|.|.||::.|...|.|||:|.|..:....|.|..|.|                :..:...:
Worm   152 NEWVLTIKNVQESDRGNYSCQINTEPITLSTGELDVKVPPV----------------VSRSTPAA 200

  Fly   408 CVVR---NVAMT-------SSVVFWKHMD-NILNYDVTRG-GVSVKTELMEDGANSTLSIAKISK 460
            ..||   ||::|       :..|.|:..| .|:.|:...| |.||       .....|.:.|:|:
Worm   201 VEVREGNNVSLTCKADGNPTPTVIWRRQDRQIIRYNGATGFGASV-------FHGPVLHLTKVSR 258

  Fly   461 TDSGNYTCSIS 471
            .....|.|..|
Worm   259 KHMSEYLCVAS 269

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
dpr20	NP_612066.1	IG_like	278..365	CDD:214653	19/86 (22%)
		Ig	279..378	CDD:299845	23/99 (23%)
		Ig	400..471	CDD:299845	19/82 (23%)
		IG_like	402..480	CDD:214653	20/82 (24%)
rig-5	NP_001251131.1	IG_like	92..189	CDD:214653	24/101 (24%)
		Ig_3	191..270	CDD:372822	21/102 (21%)
		IG	294..380	CDD:214652
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910