DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr20 and LOC1275271

DIOPT Version :10

Sequence 1:NP_612066.1 Gene:dpr20 / 38101 FlyBaseID:FBgn0035170 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_061515548.1 Gene:LOC1275271 / 1275271 VectorBaseID:AGAMI1_001882 Length:465 Species:Anopheles gambiae


Alignment Length:278 Identity:96/278 - (34%)
Similarity:139/278 - (50%) Gaps:38/278 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 HHHHDQRYG---------PHFEDVQRIGQATNLTVQAGSSIHLNCRISLLQDKTVSWVRHNTQDE 311
            ||...|..|         |:|:|.    ...|:|...|.|.:|:||:..|.:|||||:||..   
Mosquito   128 HHAQQQTPGQSSQSKWEEPYFDDT----TPRNVTGLVGKSAYLSCRVKNLGNKTVSWIRHRD--- 185

  Fly   312 GKDNGNALDLLTVGMHTYTGDKRYK-MEFQYPNNWRLKITNVKKDDEAIYECQISTHPPRVIQIN 375
                   :.:||||.:|||.|:|:: ...:..::|.|:|...:|.|..||||||||.|.|...:.
Mosquito   186 -------IHILTVGSYTYTSDQRFQATHHKDVDDWTLQIKWAQKRDAGIYECQISTQPVRSYFVT 243

  Fly   376 LHVNAPKVMIVDEVGDPLQEKYYEIDSTLQLSCVVRNVAMTSSVVFWKHMDNILNYDVTRGGVSV 440
            |.|..|...|   :|.|  :.:.:..||:.|:|.|:......:.:||.|.|.:::||.:||||||
Mosquito   244 LSVVVPTATI---IGGP--DLHVDKGSTINLTCAVKYSPEPPAYIFWYHHDEVISYDSSRGGVSV 303

  Fly   441 KTELMEDGANSTLSIAKISKTDSGNYTCSISEFQNFTIVVHILN------GESFAELHHGGAVGW 499
            .|| ..|...|.|.|......|||.|:||.|.....::.||:||      ||....:..|||...
Mosquito   304 ITE-KGDVTTSHLLIQNADLDDSGKYSCSPSNADVASVRVHVLNVRAVVSGEHPEAMQTGGATAV 367

  Fly   500 HSTWWNMVMLHAMALLVL 517
            .|:  :.::|..:.||.|
Mosquito   368 VSS--DALLLLPLILLAL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr20NP_612066.1 PHA02785 101..368 CDD:165149 44/121 (36%)
IG_like 278..365 CDD:214653 34/87 (39%)
Ig strand B 287..291 CDD:409382 1/3 (33%)
Ig strand C 300..304 CDD:409382 3/3 (100%)
Ig strand E 345..349 CDD:409382 2/3 (67%)
Ig strand F 359..364 CDD:409382 4/4 (100%)
Ig strand G 371..374 CDD:409382 0/2 (0%)
IG_like 402..480 CDD:214653 30/77 (39%)
Ig strand B 404..408 CDD:409353 1/3 (33%)
Ig strand C 417..423 CDD:409353 1/5 (20%)
Ig strand E 451..455 CDD:409353 2/3 (67%)
LOC1275271XP_061515548.1 None

Return to query results.
Submit another query.