DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr20 and negr1

DIOPT Version :9

Sequence 1:NP_612066.1 Gene:dpr20 / 38101 FlyBaseID:FBgn0035170 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_031755650.1 Gene:negr1 / 100127726 XenbaseID:XB-GENE-987949 Length:388 Species:Xenopus tropicalis


Alignment Length:225 Identity:48/225 - (21%)
Similarity:82/225 - (36%) Gaps:60/225 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 NLTVQAGSSIHLNCRISLLQDKTVSWVRHNTQDEGKDNG---NALDLLTVGMHTYTGDKRYKMEF 339
            ||.|:.|.:..|.|.:                :||...|   |...::..|...::.|.|..:..
 Frog    48 NLVVRQGETAMLRCFL----------------EEGASKGAWLNRSSIIFAGGDKWSVDPRVSIAT 96

  Fly   340 QYPNNWRLKITNVKKDDEAIYECQIST-HPPRVIQINLHVN-APKVMIVDEVGDPLQEKYYEIDS 402
            .....:.|:|..|...|:..|.|.:.| |.||.:|::|.|: :||:              |:|.|
 Frog    97 SSKQEYSLRIQKVDVSDDGPYTCSVQTEHSPRTLQVHLTVHVSPKI--------------YDISS 147

  Fly   403 --------TLQLSCVVRNVAMTSSVVFWKHMDNILNYDVTRGGVSVKTELMEDGANSTLSIAKIS 459
                    .:.|.|:.......|  :.|:|               :.....:.|:...|.|..|:
 Frog   148 DMTVNEGTNVSLICLATGKPEPS--ISWRH---------------ISPSAKQFGSGQYLDIYGIT 195

  Fly   460 KTDSGNYTCSISEFQNFTIVVHILNGESFA 489
            :..:|:|.||.....:|..|..:....:||
 Frog   196 RDQAGDYECSAENDVSFPDVKKVKVTVNFA 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr20NP_612066.1 IG_like 278..365 CDD:214653 19/89 (21%)
Ig 279..378 CDD:299845 24/102 (24%)
Ig 400..471 CDD:299845 15/78 (19%)
IG_like 402..480 CDD:214653 15/85 (18%)
negr1XP_031755650.1 Ig 44..136 CDD:416386 25/103 (24%)
FR1 44..62 CDD:409353 5/13 (38%)
Ig strand A' 47..53 CDD:409353 3/4 (75%)
Ig strand B 55..63 CDD:409353 2/7 (29%)
CDR1 63..68 CDD:409353 2/20 (10%)
FR2 69..75 CDD:409353 1/5 (20%)
Ig strand C 69..74 CDD:409353 1/4 (25%)
CDR2 76..87 CDD:409353 1/10 (10%)
Ig strand C' 78..82 CDD:409353 0/3 (0%)
Ig strand C' 84..87 CDD:409353 0/2 (0%)
FR3 88..122 CDD:409353 8/33 (24%)
Ig strand D 91..98 CDD:409353 1/6 (17%)
Ig strand E 101..107 CDD:409353 1/5 (20%)
Ig strand F 114..122 CDD:409353 2/7 (29%)
CDR3 123..127 CDD:409353 2/3 (67%)
Ig strand G 127..136 CDD:409353 4/8 (50%)
FR4 129..136 CDD:409353 2/6 (33%)
Ig_3 140..208 CDD:404760 18/98 (18%)
Ig strand A' 146..151 CDD:409353 1/4 (25%)
Ig strand B 157..164 CDD:409353 2/6 (33%)
Ig strand C 170..175 CDD:409353 2/6 (33%)
Ig strand C' 177..179 CDD:409353 0/1 (0%)
Ig strand E 187..193 CDD:409353 2/5 (40%)
Ig strand F 200..207 CDD:409353 4/6 (67%)
Ig strand G 214..222 CDD:409353 1/7 (14%)
Ig_3 226..302 CDD:404760 48/225 (21%)
putative Ig strand A 226..232 CDD:409353 48/225 (21%)
Ig strand B 242..246 CDD:409353
Ig strand C 255..259 CDD:409353
Ig strand E 281..285 CDD:409353
Ig strand F 295..300 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I11916
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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