DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dci and Mtpalpha

DIOPT Version :10

Sequence 1:NP_612065.1 Gene:Dci / 38100 FlyBaseID:FBgn0035169 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_609299.1 Gene:Mtpalpha / 34276 FlyBaseID:FBgn0028479 Length:783 Species:Drosophila melanogaster


Alignment Length:239 Identity:52/239 - (21%)
Similarity:95/239 - (39%) Gaps:27/239 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KELLVEQQGKLLVAKFNNPKKK-NCINRVAYQEMTRVLTEVNDDEGV-TIVVFTGVGDIFTSGND 69
            |.|..:....:||.|.::|..| |.:......|..||:.::..:..| :.|:.:|....|.:|.|
  Fly    50 KHLHTKVVNGVLVIKIDSPNAKVNSLGSEVSDEFERVIKDLETNPAVNSAVLISGKPGCFVAGAD 114

  Fly    70 LSQSSNTDDIDAFFKQSNATF-----KAMVLSFVNCRKIVLALVNGPAIGIGATIVGLCD--VAW 127
            :..      ::|......||.     :.|.......:|.::|.::|..:|.|..:...|.  :|.
  Fly   115 IGM------LEACQTAEEATLISHGAQVMFDRMERSKKPIVAAISGVCLGGGLELALACHYRIAT 173

  Fly   128 CSETTYFYTPFTKLGLVPEGGSSYMLPLILGRSKASEILLLSEPLSAQEAYQFNFVSRI------ 186
            ....|....|...|||:|.||.:..||.:.....|.::.|..:.:.|..|.:...|..:      
  Fly   174 KDSKTKLGLPEVMLGLLPGGGGTVRLPKLTSVPTALDMELTGKQVRADRAKRLGIVDLLVDPLGP 238

  Fly   187 -FKASELESVIWPKLRQYSELPTNSLLQGKRLV---KDGFLENL 226
             .:.:|..::.:  |.:.:....|.|..||..|   |.|.:..:
  Fly   239 GLQPAEQNTIEY--LEKTAVQVANDLASGKLRVNREKSGLVSKI 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DciNP_612065.1 CaiD 9..258 CDD:440647 51/237 (22%)
MtpalphaNP_609299.1 fa_ox_alpha_mit 38..775 CDD:131494 52/239 (22%)

Return to query results.
Submit another query.