DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dci and Eci3

DIOPT Version :10

Sequence 1:NP_612065.1 Gene:Dci / 38100 FlyBaseID:FBgn0035169 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001009275.1 Gene:Eci3 / 291076 RGDID:1310224 Length:303 Species:Rattus norvegicus


Alignment Length:261 Identity:94/261 - (36%)
Similarity:147/261 - (56%) Gaps:10/261 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QGYKELLVEQQGKLLVAKFNNPKKKNCINRVAYQEMTRVLTEVNDDEGVTIVVFTGVGDIFTSGN 68
            |..|::||..:..:....||.|.|||.|:...|:::...|...:.|..| |.|||||||.::|||
  Rat    47 QESKDILVTSEDGITTITFNRPSKKNAISFQMYKDIMLALKNASTDNSV-ITVFTGVGDYYSSGN 110

  Fly    69 DLSQSSNTDDIDAFFKQSNATFKAMVL-----SFVNCRKIVLALVNGPAIGIGATIVGLCDVAWC 128
            ||....|    ||...|...|..|::|     :|::..|.::|:|||||:||..|::||.|..:.
  Rat   111 DLRNFIN----DAGEIQDKVTMCAVLLREFVNTFIDFPKPLVAVVNGPAVGIAVTLLGLFDAVYA 171

  Fly   129 SETTYFYTPFTKLGLVPEGGSSYMLPLILGRSKASEILLLSEPLSAQEAYQFNFVSRIFKASELE 193
            |:...|:|||..||..||..|||..|.::|.:||:|:||..:.|:|:||:....|:.:|..|..|
  Rat   172 SDRATFHTPFIHLGQNPEACSSYTFPKMMGSAKAAEMLLFGKKLTAREAWAQGLVTEVFPESTFE 236

  Fly   194 SVIWPKLRQYSELPTNSLLQGKRLVKDGFLENLIKANEAECKQLLQQFQHPEFAQAIIDFASRKN 258
            :.:|.:|:.|::|..|.:...|.|:::...:.|...|..||....::.:..|:..|:.:|.|||.
  Rat   237 TEVWTRLKTYAKLSPNGMRVFKELIRNHERQKLYTVNAEECAVGQERLKSEEWKDALRNFLSRKA 301

  Fly   259 K 259
            |
  Rat   302 K 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DciNP_612065.1 CaiD 9..258 CDD:440647 90/253 (36%)
Eci3NP_001009275.1 crotonase-like 46..301 CDD:474030 92/258 (36%)

Return to query results.
Submit another query.