Sequence 1: | NP_001261227.1 | Gene: | cep290 / 38099 | FlyBaseID: | FBgn0035168 | Length: | 1978 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009296179.1 | Gene: | cep290 / 560588 | ZFINID: | ZDB-GENE-041111-243 | Length: | 2741 | Species: | Danio rerio |
Alignment Length: | 2529 | Identity: | 532/2529 - (21%) |
---|---|---|---|
Similarity: | 966/2529 - (38%) | Gaps: | 710/2529 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSMD----------IPETVSLRKFRDFSARQKQELY------ETLLELA--------ESIDELPK 41
Fly 42 KSLRKTLELTLAVLEYKGEQVQQLQESAAGGLSSDRR-LQDENEKLKRMLQKLEDERDGLKSKAK 105
Fly 106 ELGEEIR---QLELRLQEAAQQAEISDKDSSDPLSELD-KQEQLLQNIDSKNK--------HIKR 158
Fly 159 LLKEIE---TLQNQNIAQSKTIVLHEREL--------QTIKANLVQLSQDITKVEQERKSLKQKE 212
Fly 213 QQQALEITRLEGNLTFLEVEREKQEVEMRQFLDKYE--------------AKSLGWRQALDDRDK 263
Fly 264 EV---ERLKKQLEGKSISSGQTNS--SNSQSQQEEEHAKLRQLLESREQRIEKLEEKIKSMAEEM 323
Fly 324 VSSTRAMNQLCQ--EKERAHDPEQPR------ACCQMIEERLREATARCQQLSEMLEAAEQDNVL 380
Fly 381 KSQQALHAISALEAYKRDEDGLIPALRRCSGLEQKVAARDKQLRAYIQELNSL----HEVVQENE 441
Fly 442 LLRRKLHI-PDDVVIMAKNVHS---KQRNKD-------KQIERLTLKLRTSEELRLQLK------ 489
Fly 490 -------------LEKSELRRKLLELQQDSPQT------LNESLQAPSEVGEVPHSVHLENSPRR 535
Fly 536 GQGDGAASSEMQNRYDEVLAENETLRSGMYEILEKLREYD---ATSEHITIDSDLLRRLIEAL-- 595
Fly 596 ---PGGTTTPQRLQGQLLELKAREEALRQ------------------------LLEQQNYSDSET 633
Fly 634 GELSSVHSLCEVPEIAEEHPVEEDAV--LNTAT-------------------------RPSSPTE 671
Fly 672 ATMGLRRPTVPDPEE--KPTNEALAEL-----------SILRKHYDELRLHMSADGSDLMNRNQE 723
Fly 724 LHDQMIALE-------------LQLEQQ-RNSYSYMRRDYDQL---LTETRKQELRFID----DK 767
Fly 768 ASLAR----------------------------------------QLEHSKSELCEAREELEQVN 792
Fly 793 ------RRNLYTAE-------------------------------------------EQQKLEHR 808
Fly 809 NAILSMQLGQAM-EQLLGELKPTEICAEYGIIRENYQLD---------YITAQDFE-EQQQELLT 862
Fly 863 WRSK----------------QAELQRETKQLEGLLHVANEQIHS----QQRLLNEITDNHINLRH 907
Fly 908 LVADLQSSSDEKLMLAKVQRDLDSVK----AECSRLETEREKLQLKADCLQTQLEASELSLKQTQ 968
Fly 969 QDFQQERTNSDIKHKFLQHSLFMLKDKYAKFTPLVFLTNFVFAYQKFQR---RLEEEQVQQRHRD 1030
Fly 1031 HTALIDEVTAVVQAKI--------GLNE--------ESSQQLVKLIKSETQTRLLE--------- 1070
Fly 1071 QRCEI-----LQAKQEELVRELGELRMSQATDTEHWSTIQALFGEGEPRSQLKVDAETNTDAVAP 1130
Fly 1131 NLAMR--RAVQLIDRESSPIGSPL-------RKHPH--LDTAT--QTLEAQVEFSETAVQTNGIL 1182
Fly 1183 SQQNQAVQTADAVEDNRRDSRAELQKMQETLQEANQRIEILGKQLEASRSESRESASPQGGVVEK 1247
Fly 1248 TILSFHTLLLEKDQSIQKYQDLLQTERDQSQQALSKQVAENESLRATVNNLNFNIKTKDAEIQGL 1312
Fly 1313 KEKLRQKPEVPVERNPSTD--------SRSSSSSDSSVNELTDEKIEELFESSSVERPPQEELEV 1369
Fly 1370 PVEAGPENIVTEEPEGEEEK---QDTEELK-EVPTLHKQIKDLKDKLEYSERS-----LKTREEE 1425
Fly 1426 VDILKEKLKLCQEREKSVESTVNPELDQLRIFLDEK----------------------DKHIKDL 1468
Fly 1469 MDTLKNFHDDQQ------RYIKDTSNFSEDQIAKLAADLNRTEATNKIYHTQMEALRRQLANVTQ 1527
Fly 1528 REKQARDLSQSLRQQLLKRPVVSIKTELNARVKNENQL-----KRIQQLELDLD--EARGQLQRQ 1585
Fly 1586 QTLLEAKRTRSANEVQLWEKQKRYQQQAEKTKARLEETELALEKTRALLQAARTTIARLEKDKQI 1650
Fly 1651 LESKL-GRNGPPSNSSGGNNLKCCR------------------------TPSCPNLQHV------ 1684
Fly 1685 ----------GVSKFAPS-PSE----SPETYTGPS------------SECSSPAHHHTQIFDQSQ 1722
Fly 1723 LDLIE------------------------ALKSRIELQQRKIIAME-LEGRGSNALTTELEKLQE 1762
Fly 1763 RCQAIE-AQNIRLEARNLQLQLDSDLLRQGDSSDRLQKRIKHLEDYIMALKEEMARNESRRELGS 1826
Fly 1827 GLKVST-NQGQ-----------------------------------SAEQTILSLRNLVE-KLRS 1854
Fly 1855 ENKFLKDGRRSTESRS-----SMDSTPAEA-ARLQQQ---HAEALEKISALQQELQKRTTKCSQC 1910
Fly 1911 GGRSKDAANE-ELKFIKEQLVKKTQLLQKAKVLLTRAAAKEKVLREQLALWKRKCSELQ 1968 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cep290 | NP_001261227.1 | SMC_prok_B | 208..>973 | CDD:274008 | 222/1048 (21%) |
cep290 | XP_009296179.1 | DUF342 | <77..185 | CDD:302792 | 36/123 (29%) |
Smc | 131..1004 | CDD:224117 | 249/1176 (21%) | ||
SMC_prok_B | 1125..1992 | CDD:274008 | 213/1050 (20%) | ||
CEP209_CC5 | 1279..1406 | CDD:293182 | 28/137 (20%) | ||
SMC_prok_B | 1781..2650 | CDD:274008 | 49/245 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_28HFX | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D19529at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR18879 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.970 |