DRSC/TRiP Functional Genomics Resources

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Protein Alignment JMJD5 and Kdm8

DIOPT Version :9

Sequence 1:NP_612063.2 Gene:JMJD5 / 38097 FlyBaseID:FBgn0035166 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_084118.1 Gene:Kdm8 / 77035 MGIID:1924285 Length:414 Species:Mus musculus


Alignment Length:428 Identity:151/428 - (35%)
Similarity:214/428 - (50%) Gaps:66/428 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ELTQLLP-----RWVDLENVVRGEVEARYILKRAADHLANLRSGGDSGAEETGYLVG------AL 60
            ||..|||     ..:||...|...|.|  :|::|.            |....|:..|      |:
Mouse    18 ELRTLLPDKEEELKLDLGEKVDRSVAA--LLRQAV------------GLFYAGHWQGCLQASEAV 68

  Fly    61 VDRNWERIHTGHFSQVPLVTRKIYAIACCFKIFFLLLESTSPAQKDACSEIL---DEAQLLGCME 122
            :|.:||:::||.:..|....|::|:..|..|...|   ..:|.:.....|.|   |...|:|.  
Mouse    69 LDYSWEKLNTGPWRDVDKEWRRVYSFGCLLKALCL---CQAPQKATTVVEALRVCDMGLLMGA-- 128

  Fly   123 DWSELKVALMDYLDKDGAVALNSAPLPTLEPL--------TRVTSNCD------------IPQLD 167
                  ..|.|.|.|..|| |.:..||..:|.        ....:.||            :|:|.
Mouse   129 ------AILEDILLKVVAV-LQTHQLPGKQPARGPHQDQPATKKAKCDASPAPDVMLERMVPRLR 186

  Fly   168 APSLEEFQTKCFEAGQPTLLLNTIQHWPALHKWLDLNYLLQVAGNRTVPIEIGSNYASDEWSQQL 232
            .|.|:.|:......|:|.:|.....|||.:.|| .|.|:.::||.||||:|:||.|..::|||.|
Mouse   187 CPPLQYFKQHFLVPGRPVILEGVADHWPCMKKW-SLQYIQEIAGCRTVPVEVGSRYTDEDWSQTL 250

  Fly   233 VKIRDFLSRQFGKEPSKAGQNIEYLAQHELFAQIPALKEDISIPDYCTISNEDTPGAVDIKAWLG 297
            :.:.:|:.:....|....|    |||||:||.|||.||.||||||||.:.|.:.. .:.|.||.|
Mouse   251 MTVDEFIQKFILSEAKDVG----YLAQHQLFDQIPELKRDISIPDYCCLGNGEEE-EITINAWFG 310

  Fly   298 PAGTVSPMHYDPKHNLLCQVFGSKRIILAAPADTDNLYPHDSEFLANTARIDAAQLDPETYPLVA 362
            |.||:||:|.||:.|.|.||.|.|.|.|.:|.:::.:|||::..|.||:::|....|.|.:|...
Mouse   311 PQGTISPLHQDPQQNFLVQVLGRKYIRLYSPQESEAVYPHETHILHNTSQVDVENPDLEKFPKFT 375

  Fly   363 KVKFYQLLLQPGDCLYMPPKWWHYVRSEAPSFSVSFWW 400
            :..|...:|.|||.|::|.|:||||||...||||||||
Mouse   376 EAPFLSCILSPGDTLFIPAKYWHYVRSLDLSFSVSFWW 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JMJD5NP_612063.2 Cupin_8 172..401 CDD:290351 102/229 (45%)
Kdm8NP_084118.1 Interaction with RCCD1. /evidence=ECO:0000250|UniProtKB:Q8N371 1..107 27/105 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 148..169 2/20 (10%)
Cupin_8 189..414 CDD:290351 103/231 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850806
Domainoid 1 1.000 219 1.000 Domainoid score I2634
eggNOG 1 0.900 - - E1_KOG2132
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H49791
Inparanoid 1 1.050 243 1.000 Inparanoid score I3295
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55837
OrthoDB 1 1.010 - - D1385616at2759
OrthoFinder 1 1.000 - - FOG0005789
OrthoInspector 1 1.000 - - oto94754
orthoMCL 1 0.900 - - OOG6_103632
Panther 1 1.100 - - LDO PTHR12461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4765
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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