DRSC/TRiP Functional Genomics Resources

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Protein Alignment JMJD5 and Kdm8

DIOPT Version :10

Sequence 1:NP_612063.2 Gene:JMJD5 / 38097 FlyBaseID:FBgn0035166 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_084118.1 Gene:Kdm8 / 77035 MGIID:1924285 Length:414 Species:Mus musculus


Alignment Length:428 Identity:151/428 - (35%)
Similarity:214/428 - (50%) Gaps:66/428 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ELTQLLP-----RWVDLENVVRGEVEARYILKRAADHLANLRSGGDSGAEETGYLVG------AL 60
            ||..|||     ..:||...|...|.|  :|::|.            |....|:..|      |:
Mouse    18 ELRTLLPDKEEELKLDLGEKVDRSVAA--LLRQAV------------GLFYAGHWQGCLQASEAV 68

  Fly    61 VDRNWERIHTGHFSQVPLVTRKIYAIACCFKIFFLLLESTSPAQKDACSEIL---DEAQLLGCME 122
            :|.:||:::||.:..|....|::|:..|..|...|   ..:|.:.....|.|   |...|:|.  
Mouse    69 LDYSWEKLNTGPWRDVDKEWRRVYSFGCLLKALCL---CQAPQKATTVVEALRVCDMGLLMGA-- 128

  Fly   123 DWSELKVALMDYLDKDGAVALNSAPLPTLEPL--------TRVTSNCD------------IPQLD 167
                  ..|.|.|.|..|| |.:..||..:|.        ....:.||            :|:|.
Mouse   129 ------AILEDILLKVVAV-LQTHQLPGKQPARGPHQDQPATKKAKCDASPAPDVMLERMVPRLR 186

  Fly   168 APSLEEFQTKCFEAGQPTLLLNTIQHWPALHKWLDLNYLLQVAGNRTVPIEIGSNYASDEWSQQL 232
            .|.|:.|:......|:|.:|.....|||.:.|| .|.|:.::||.||||:|:||.|..::|||.|
Mouse   187 CPPLQYFKQHFLVPGRPVILEGVADHWPCMKKW-SLQYIQEIAGCRTVPVEVGSRYTDEDWSQTL 250

  Fly   233 VKIRDFLSRQFGKEPSKAGQNIEYLAQHELFAQIPALKEDISIPDYCTISNEDTPGAVDIKAWLG 297
            :.:.:|:.:....|....|    |||||:||.|||.||.||||||||.:.|.:.. .:.|.||.|
Mouse   251 MTVDEFIQKFILSEAKDVG----YLAQHQLFDQIPELKRDISIPDYCCLGNGEEE-EITINAWFG 310

  Fly   298 PAGTVSPMHYDPKHNLLCQVFGSKRIILAAPADTDNLYPHDSEFLANTARIDAAQLDPETYPLVA 362
            |.||:||:|.||:.|.|.||.|.|.|.|.:|.:::.:|||::..|.||:::|....|.|.:|...
Mouse   311 PQGTISPLHQDPQQNFLVQVLGRKYIRLYSPQESEAVYPHETHILHNTSQVDVENPDLEKFPKFT 375

  Fly   363 KVKFYQLLLQPGDCLYMPPKWWHYVRSEAPSFSVSFWW 400
            :..|...:|.|||.|::|.|:||||||...||||||||
Mouse   376 EAPFLSCILSPGDTLFIPAKYWHYVRSLDLSFSVSFWW 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JMJD5NP_612063.2 Cupin_8 172..401 CDD:463936 102/229 (45%)
Kdm8NP_084118.1 Interaction with RCCD1. /evidence=ECO:0000250|UniProtKB:Q8N371 1..107 27/105 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 148..169 2/20 (10%)
Cupin_8 189..414 CDD:463936 103/231 (45%)

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