DRSC/TRiP Functional Genomics Resources

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Protein Alignment JMJD5 and Hif1an

DIOPT Version :9

Sequence 1:NP_612063.2 Gene:JMJD5 / 38097 FlyBaseID:FBgn0035166 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_795932.2 Gene:Hif1an / 319594 MGIID:2442345 Length:349 Species:Mus musculus


Alignment Length:328 Identity:85/328 - (25%)
Similarity:134/328 - (40%) Gaps:80/328 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 EILDEAQLLGCMEDWSELKVALMDYLDKDGAVALNSAPLPTLEPLTRVTSNCDIPQLDAPSLEEF 174
            |..:||:..|...|.|:|:                |...|| .|:.|::      |.| |..||.
Mouse    15 EAREEAEAPGPAWDESQLR----------------SYSFPT-RPIPRLS------QSD-PRAEEL 55

  Fly   175 QTKCFEAGQPTLLLNTIQHWPALHKWLDLNYLLQVAGNRTVPIEIGSNYASDEWSQQLVKIRDFL 239
                .|..:|.:|.:|...:||| || ||.||.:..||....:...|.:          |...:.
Mouse    56 ----IENEEPVVLTDTNLVYPAL-KW-DLEYLQENIGNGDFSVYSASTH----------KFLYYD 104

  Fly   240 SRQFGK-EPSKAGQNIEYLAQHELFAQIPAL-----KEDISIPDYCTISNEDTPG---AVDI--- 292
            .::.|. :..|...|.|.:..||...::.|:     :|.:    |...:..||.|   .:|.   
Mouse   105 EKKMGNFQNFKPRSNREEIKFHEFVEKLQAIQQRGGEERL----YLQQTLNDTVGRKIVMDFLGF 165

  Fly   293 -----------KAW---------LGPAGTVSPMHYDPKHNLLCQVFGSKRIILAAPADTDNLYPH 337
                       :.|         :|..|.|:|.|||.:.|...|:.|.||.||..|...:.|||:
Mouse   166 NWNWINKQQGKRGWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGHKRCILFPPDQFECLYPY 230

  Fly   338 DSEFLAN-TARIDAAQLDPETYPLVAKVKFYQLLLQPGDCLYMPPKWWHYVRS---EAPSFSVSF 398
            ......: .:::|....|.|.:|....|..|:.::.|||.||:|..|||::.|   ...:.:|:|
Mouse   231 PVHHPCDRQSQVDFDNPDYERFPNFRNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNF 295

  Fly   399 WWE 401
            |::
Mouse   296 WYK 298

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
JMJD5NP_612063.2 Cupin_8 172..401 CDD:290351 70/264 (27%)
Hif1anNP_795932.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51 14/59 (24%)
Interaction with VHL. /evidence=ECO:0000250 2..125 38/149 (26%)
Cupin_8 53..297 CDD:290351 69/263 (26%)
Substrate binding. /evidence=ECO:0000250 181..183 0/1 (0%)
Substrate binding. /evidence=ECO:0000250 201..203 1/1 (100%)