DRSC/TRiP Functional Genomics Resources

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Protein Alignment JMJD5 and kdm8

DIOPT Version :9

Sequence 1:NP_612063.2 Gene:JMJD5 / 38097 FlyBaseID:FBgn0035166 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_001121525.1 Gene:kdm8 / 100158649 XenbaseID:XB-GENE-5811534 Length:443 Species:Xenopus tropicalis


Alignment Length:406 Identity:135/406 - (33%)
Similarity:205/406 - (50%) Gaps:70/406 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 ETGYLVGALVDRNWERIHTGHFSQVPLVTRKIYAIACCFKIFFL--------------------- 95
            :.|.|...|:|.:||:::..::.:|....|.:|:..|.|:...|                     
 Frog    50 QCGALGELLIDYSWEKLNARNWREVGREWRAVYSYGCLFRAVGLCSVTGSIEEALQVCDIGLLMG 114

  Fly    96 -------------LLESTSPAQKDACSEI--------LDEAQLLGCMEDWSELKVALM------- 132
                         :|:..:|::::...|.        |:.::|....|..::...|.:       
 Frog   115 AEIMDNLLGRIISVLQRIAPSREETKLEAERGVREPGLESSKLHSPGEHSNKKSFASVTGRKRIR 179

  Fly   133 -----DYLDKDGAVALNSAP---LPTLEPLTRVTSNCDIPQLDAPSLEEFQTKCFEAGQPTLLLN 189
                 |: |..|.......|   :|.|:      |...||:|..||||.|:.......:|.:|..
 Frog   180 EGPEADF-DPKGCSISEKVPCLLVPVLD------SETAIPKLHCPSLEHFRDHYLVPQKPVVLEG 237

  Fly   190 TIQHWPALHKWLDLNYLLQVAGNRTVPIEIGSNYASDEWSQQLVKIRDFLSRQFGKEPSKAGQNI 254
            .|.|||.|.|| .:.|:.:|||.||||:|:||.|...||||:|:.:.:|:::....:.:..|   
 Frog   238 VIDHWPCLKKW-SVEYIQRVAGCRTVPVELGSRYTDAEWSQRLMTVNEFITKYILDKQNGIG--- 298

  Fly   255 EYLAQHELFAQIPALKEDISIPDYCTISNEDTPGAVDIKAWLGPAGTVSPMHYDPKHNLLCQVFG 319
             |||||:||.|||.|||||.|||||.: .|.:...:.|.||.||||||||:|.||:.|.|.|:.|
 Frog   299 -YLAQHQLFEQIPELKEDICIPDYCCL-GEASEDEITINAWFGPAGTVSPLHQDPQQNFLAQIVG 361

  Fly   320 SKRIILAAPADTDNLYPHDSEFLANTARIDAAQLDPETYPLVAKVKFYQLLLQPGDCLYMPPKWW 384
            .|.|.:.:.|:|:.|||.||..|.||:::|....|...:|..::..:.:.:|.||..|::|.|||
 Frog   362 RKYIRVYSVAETEKLYPFDSSILHNTSQVDVESPDQNKFPRFSQASYQECILSPGQVLFIPVKWW 426

  Fly   385 HYVRSEAPSFSVSFWW 400
            ||:|:...||||||||
 Frog   427 HYIRALDLSFSVSFWW 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JMJD5NP_612063.2 Cupin_8 172..401 CDD:290351 103/229 (45%)
kdm8NP_001121525.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 139..174 5/34 (15%)
Cupin_8 222..443 CDD:372651 102/227 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 218 1.000 Domainoid score I2612
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H49791
Inparanoid 1 1.050 260 1.000 Inparanoid score I3036
OMA 1 1.010 - - QHG55837
OrthoDB 1 1.010 - - D1385616at2759
OrthoFinder 1 1.000 - - FOG0005789
OrthoInspector 1 1.000 - - oto104951
Panther 1 1.100 - - LDO PTHR12461
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3673
SonicParanoid 1 1.000 - - X4765
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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