DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42553 and RGD1308147

DIOPT Version :9

Sequence 1:NP_612060.2 Gene:CG42553 / 38094 FlyBaseID:FBgn0260755 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_001014032.1 Gene:RGD1308147 / 307008 RGDID:1308147 Length:421 Species:Rattus norvegicus


Alignment Length:402 Identity:135/402 - (33%)
Similarity:211/402 - (52%) Gaps:48/402 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AHKKVKLGEELKKALKDFEDLPGVSKVQRKIQQELKFLNKVITTR-SVKEHHITSSNFVYYDFLI 77
            |.:.:|..|.|.::.|.  .:.|.:|:..|::.|||||.|:.:.: ::||.|:.|:|..:...::
  Rat    14 AKELIKRAESLSRSKKG--GIEGGAKLCSKLKSELKFLQKIESGKVAIKESHLQSTNLTHLKAIV 76

  Fly    78 KTLRLQQGVVDINAVFRLE---SRDSPLRVDIVANNGLKWVKVIARNSKSVEDAARGCVSIGARS 139
            ::....:.||.:..||...   .....|.||:|||.|..|||.|.|.::::.:...|....|.:|
  Rat    77 ESAENLEEVVSVLRVFGYTDSLGEKQTLVVDVVANGGHTWVKAIGRKAEALHNIWLGRGQYGDKS 141

  Fly   140 VIDQAEDYLEASELSFCMFQRPKIVFYFSNKIEDSLHEELMEMGVQ--------TASLDSPD--- 193
            :|:||||:|:||......:..|.|||.|.|.:...:.::|.:||:.        .:.|:.|:   
  Rat   142 IIEQAEDFLQASRQQPVQYSNPHIVFAFYNSVSSPMADKLKDMGISVRGDIVAVNSLLNHPEEYL 206

  Fly   194 ------------------TDLD-----------MYATTSNELNLDVTTLLAYVSALTNGSANWVY 229
                              .|||           :.......:|||:|||:.||||::.|..::::
  Rat   207 LSESESDDEGQELLQVTRVDLDNVLARVAFPTEIKVDVCRRVNLDITTLITYVSAMSYGGCHFIF 271

  Fly   230 KEPLLTEQAERERASPLKPLLEKILEGKTLVCCQLAYDAFQSILDIVGGEGERKRAEELMKRVTV 294
            ||.:||||||:||...:.|.||..::.|.|..|:.|...||||||.:||.|||:||..|:||:.|
  Rat   272 KEKVLTEQAEQERKERVLPQLEAFMKDKELFACESAVKDFQSILDTLGGPGERERAAVLIKRINV 336

  Fly   295 YPDVETIPEEFSHIRFTANVNERSLKIFSFGMARQIFTVTSNKAFVRSAKMQGINVPVFVHASVA 359
            .||..:  |....:..::.:|.|||.||..|...:..|:|:|..|||:|..||:...||:|...|
  Rat   337 VPDQPS--ERALKLVASSKINSRSLTIFGTGDTLKAITMTANSGFVRAANNQGVKFSVFIHQPRA 399

  Fly   360 LTEGKQATGRPL 371
            |||.|:|...||
  Rat   400 LTESKEALAVPL 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42553NP_612060.2 DUF1308 41..361 CDD:284430 121/363 (33%)
RGD1308147NP_001014032.1 DUF1308 38..401 CDD:284430 121/364 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353837
Domainoid 1 1.000 139 1.000 Domainoid score I4704
eggNOG 1 0.900 - - E1_KOG4529
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11439
Inparanoid 1 1.050 212 1.000 Inparanoid score I3563
OMA 1 1.010 - - QHG52563
OrthoDB 1 1.010 - - D1139278at2759
OrthoFinder 1 1.000 - - FOG0006171
OrthoInspector 1 1.000 - - oto95955
orthoMCL 1 0.900 - - OOG6_106746
Panther 1 1.100 - - LDO PTHR13379
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5894
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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