Protein Alignment Sf3b3 and SAP130b

DIOPT Version :9

• Sequence 1: NP_728546.1
• Gene: Sf3b3 / 38093
• FlyBaseID: FBgn0035162
• Length: 1227
• Species: Drosophila melanogaster
• Sequence 2: NP_567016.1
• Gene: SAP130b / 824688
• AraportID: AT3G55220
• Length: 1214
• Species: Arabidopsis thaliana
• Alignment Length: 1242
• Identity: 687/1242 - (55%)
• Similarity: 901/1242 - (72%)
• Gaps: 48/1242 - (3%)

  Fly     1 MYLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFGCVRAL 65
            ||||:||||:|||:..|::|||||||.||:.::|||.|:|||||.| ||:.|:.|.|:||.:|:|
plant     1 MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDEN-GKIQTIHSVEVFGAIRSL 64

  Fly    66 MAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPGQYFAIDPKGRAV 130
            ..|||||..|||||||||||||||||||..||..:||||||||||||||||||||.|:|||||||
plant    65 AQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAV 129

  Fly   131 MIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNPMFACLEIDYEEADMD 195
            ||||.|||||.|::||||.||||||||||||||:|:.|.:.|||.|||||:||.:|:||.|||.|
plant   130 MIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQD 194

  Fly   196 PSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPGGNDGPSGVLICSENYLTYKN 260
            |:|.||...|:.|||||||||||||.||:|.|::..||.||:||||.|||||||:|:||::.|.|
plant   195 PTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMN 259

  Fly   261 LGDQHDIRCPIPRRRNDLDDPERGMIFICSATHRTKSMYFFLLQTEQGDIFKITLETDDDVVSEI 325
            .| ..|:|..|| ||.|| ..|||::.:.:|.|:.|:|:|||:|||.||:||:||:.:.|.|||:
plant   260 QG-HPDVRAVIP-RRTDL-PAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSEL 321

  Fly   326 KLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDD-EPEFSSAMPLEEG-ETFFFA 388
            |:|||||:|.|:::||||.||||.|||||||.|||...:|::.| |...|:.|..||| :..||.
plant   322 KVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQ 386

  Fly   389 PRALKNLVLVDELPSFAPIITSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELP 453
            ||.|||||.:|::.|..|::..:|.::..|:|||::.||||||||:||:||.||.::|||||:||
plant   387 PRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLP 451

  Fly   454 GNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQ 518
            |.|:|||||||...|||||||:|||.||||||||||.||||.|||||.|||:|..:.:|||:|:|
plant   452 GQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQ 516

  Fly   519 VYPDGIRHIRSDKRVNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEM 583
            |:|:||||||.|.|:|||:.|||:||.|...|:.||||.|||.||:|||.|.||:|.| .|:.||
plant   517 VHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLME-VEKHEM 580

  Fly   584 PAEIMCMALGTVPEGEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHT 648
            ..::.|:.:..||||.:||.|||||..|||||||||||::||...|:|::.|..|||..:|:
plant   581 SGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEV--- 642

  Fly   649 ESTTQGGLDDDAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRI 713
             ..:.|| ||.|      ::...::||.||.||||.|||:|.|:|.|:|:|:|:||.:|.|||.|
plant   643 -QASIGG-DDGA------DHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSI 699

  Fly   714 KMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEK 778
            .::|..|:|.:|||.||.|.|:..||||||||||||:|:.|||:||:||:|:::.:.|||..:::
plant   700 SVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDR 764

  Fly   779 LGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYT-EDTKSARKEQM------------AE 830
            ||..||:...||:||||.||:||....::|.|:|..|:| |:.::||||..            |:
plant   765 LGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNAD 829

  Fly   831 EMRSAAGDEERELAREMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNE 895
            :|.:.|.||::|           :.|.::.:..|||....|.|.||.||.....|...:.|..||
plant   830 QMENGADDEDKE-----------DPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNE 883

  Fly   896 AIMSMAMLKFSIAADGRY--YLAVGIAKDLQLNPRIS-QGGCIDIYKIDPTCSSLEFMHRTDIDE 957
            |..|:..:.|.   |..|  .||||..|.:|..|:.: ..|.|.||:......|||.:|:|.::.
plant   884 AAYSVCTVNFH---DKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEG 945

  Fly   958 IPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVFFI 1022
            :|.|||.||||||||.|.:||:||.|||::|||||||..|..|::||....|:||.|:|||..:.
plant   946 VPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYC 1010

  Fly  1023 RYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLW 1087
            :|||.||||.|||||..|||:||:..:|:||:|.||||||:...|||..::::::|||||.|..|
plant  1011 KYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKW 1075

  Fly  1088 DRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQ 1152
            ::|.|:||..|.:.|..||||:::..||||::||||||:::|.|:.|::||...||||:|.|||.
plant  1076 EQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFS 1140

  Fly  1153 HLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKK 1217
            |||||||.|.||||||||::|||:|:|||:|:|||||||:.::....|:.||.::.|||.:|.||
plant  1141 HLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKK 1205

  Fly  1218 LEDIRTR 1224
            |||.|.:
plant  1206 LEDARNK 1212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sf3b3	NP_728546.1	MMS1_N	76..592	CDD:402179	329/517 (64%)
		CPSF_A	872..1194	CDD:397339	169/324 (52%)
SAP130b	NP_567016.1	MMS1_N	75..589	CDD:402179	329/517 (64%)
		WD40	581..>651	CDD:421866	35/74 (47%)
		CPSF_A	861..1180	CDD:397339	168/321 (52%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	663	1.000	Domainoid score	I22
eggNOG	1	0.900	-	-		E1_KOG1898
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H6579
Inparanoid	1	1.050	1349	1.000	Inparanoid score	I13
OMA	1	1.010	-	-		QHG54483
OrthoDB	1	1.010	-	-		D97116at2759
OrthoFinder	1	1.000	-	-		FOG0004388
OrthoInspector	1	1.000	-	-		otm2795
orthoMCL	1	0.900	-	-		OOG6_102496
Panther	1	1.100	-	-	LDO	PTHR10644
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X3106
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	14	13.840