Protein Alignment Sf3b3 and AT3G11960

DIOPT Version :9

• Sequence 1: NP_728546.1
• Gene: Sf3b3 / 38093
• FlyBaseID: FBgn0035162
• Length: 1227
• Species: Drosophila melanogaster
• Sequence 2: NP_001327782.1
• Gene: AT3G11960 / 820369
• AraportID: AT3G11960
• Length: 1379
• Species: Arabidopsis thaliana
• Alignment Length: 1521
• Identity: 304/1521 - (19%)
• Similarity: 520/1521 - (34%)
• Gaps: 475/1521 - (31%)

  Fly     2 YLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFGCVRAL- 65
            ||....|:.:. |....:|.|.....::::..:...:||: .....|.|.::....:||.::.|
plant    36 YLAKCILRPSV-VLQVAYGYFRSPSSRDIVFGKETCIELV-VIGEDGIVESVCEQYVFGTIKDLA 98

  Fly    66 ---MAFRLTGGT----KDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPGQYFAI 123
               .:.:|...:    ||.:.|.||||::..|.::...:....:........|..||..|:...|
plant    99 VIPQSSKLYSNSLQMGKDLLAVLSDSGKLSFLSFSNEMHRFSPIQHVQLSTPGNSRIQLGRMLTI 163

  Fly   124 DPKGRAVMIGAVEKQKLAYIMNRDTQARL---TISSPLE--------AHKSNTLTYHMVGVDVGF 177
            |..|..:.:.|...:...:.::..:...:   .||.|.|        ...|.|: :.|..:...|
plant   164 DSSGLFLAVSAYHDRFALFSLSTSSMGDIIHQRISYPSEDGGNGSSIQAISGTI-WSMCFISKDF 227

  Fly   178 DN-----PMFA-------------------------CLEIDYEEA-------------------- 192
            :.     |:.|                         ||..:|.|.
plant   228 NESKEYAPILAIVINRKGSLMNELALFRWNVKEESICLISEYVETGALAHSIVEVPHSSGFAFLF 292

  Fly   193 --------DM-DPSGDAAQ-RTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPGGNDGPSG 247
                    |: ||...... ||  :|.|....|...|.|       ||...    |..|:|....
plant   293 RIGDVLLMDLRDPQNPCCLFRT--SLDFVPASLMEEHFV-------EESCR----VQDGDDEGCN 344

  Fly   248 VLICSENYLTYKNLGDQHDIRCPIPR---RRNDLD------------DPERGMIFICSATHRTKS 297
            |::|:     ...|.| |::|...|.   ..:|:.            :||.        .|..:
plant   345 VVVCA-----LLELRD-HEVRDHDPMFIDTESDIGKLSSKNVSSWTWEPEN--------NHNPR- 394

  Fly   298 MYFFLLQTEQGDIFKITLETDDDVV----SEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYL 358
               .::..:.||.|...|..:||.|    ||...|..    |...:..::.|||...:|..:..:
plant   395 ---MIICLDNGDFFMFELIYEDDGVKVNLSECLYKGL----PCKDILWIEGGFLATFAEMADGTV 452

  Fly   359 YQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIITSQVADLANEDTPQL 423
            :::                             ..:.|..:..:.:.|||:...|.|..||...|:
plant   453 FKL-----------------------------GTEKLHWMSSIQNIAPILDFSVMDDQNEKRDQI 488

  Fly   424 YVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNP-----NAVWTVKKRADDEFDAYIIVSFVNATL 483
            :..||..|..:||::|.|:.|.::    |...|     ...||||.:..|.:.:::::|||..|.
plant   489 FACCGVTPEGSLRIIRSGINVEKL----LKTAPVYQGITGTWTVKMKLTDVYHSFLVLSFVEETR 549

  Fly   484 VLSIGETVEEVTDS-GFLGTTPTLCCAALGDDALVQVYPDGIRHIR------------SDKRVNE 535
            |||:|.:.::|||| ||.....|..|..:.|..|||::.|.||...            |....:.
plant   550 VLSVGLSFKDVTDSVGFQSDVCTFACGLVADGLLVQIHQDAIRLCMPTMDAHSDGIPVSSPFFSS 614

  Fly   536 WKAPGKKSITKCAVNQRQVVITLSG-----------------------RELVYFEMD----PTGE 573
            | .|...||:..||.|..:|::.|.                       |..:.:|:.    |...
plant   615 W-FPENVSISLGAVGQNLIVVSTSNPCFLSILGVKSVSSQCCEIYEIQRVTLQYEVSCISVPQKH 678

  Fly   574 LNEYTERSEMPAEIMCMALGTVPEGEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAE 638
            :.:...|...| :..|.|  .:|...::.:...:|....:|.:||...:.    ..::.|.|.
plant   679 IGKKRSRDSSP-DNFCKA--AIPSAMEQGYTFLIGTHKPSVEVLSFTEDG----VGVRVLASG-- 734

  Fly   639 SLCLVEMGHTESTTQGG---------LDDDAPAQRSGNNKGTIYLNIGLSNGVLLR--------- 685
               ||.:.:|..|...|         |.|.            :|:..||.||:|||
plant   735 ---LVSLTNTMGTVISGCIPQDVRLVLVDQ------------LYVLSGLRNGMLLRFEWAPFSNS 784

  Fly   686 -------------TVLDPVSG-------DLADTRTRYLGSRPVKLFRIKMQGSEAVLAMSSRTWL 730
                         ..:|.|.|       :|....||.:|..||.|..........::|:|.|.||
plant   785 SGLNCPDYFSHCKEEMDTVVGKKDNLPVNLLLIATRRIGITPVFLVPFSDSLDSDIIALSDRPWL 849

  Fly   731 SYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPR 795
            ....:.....|.:|::...:|:...|.:|.:||:.:|.|.|.::.:.. ....|...|.|..|||
plant   850 LQTARQSLSYTSISFQPSTHATPVCSFECPQGILFVSENCLHLVEMVH-SKRRNAQKFQLGGTPR 913

  Fly   796 TFVIHPDTGRMLIAETD-HNAYTEDTKSARKEQMAEEMRSAAGDEERELAREMANAFINEVLPED 859
            ..:.|.::..:::..|| ::..|.|
plant   914 KVIYHSESKLLIVMRTDLYDTCTSD---------------------------------------- 938

  Fly   860 VFSSPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQ 924
                           |.|:|.:.|..:.|..|...|...||.:::    ....:.|.||.:  |.
plant   939 ---------------ICCVDPLSGSVLSSYKLKPGETGKSMELVR----VGNEHVLVVGTS--LS 982

  Fly   925 LNPRI-------SQGGCIDIYKIDPT--------------CSSLEFMHRTD-------------- 954
            ..|.|       |..|.:.|..::.|              |||.:   ||.
plant   983 SGPAILPSGEAESTKGRVIILCLEHTQNSDSGSMTICSKACSSSQ---RTSPFHDVVGYTTENLS 1044

  Fly   955 -----------------IDEI-------------PG---ALCGFQGR-LLAGCGRMLRIYDF--- 982
                             :||.             ||   |:|.:... .||..|....:..|
plant  1045 SSSLCSSPDDYSYDGIKLDEAETWQLRLASSTTWPGMVLAICPYLDHYFLASAGNAFYVCGFPND 1109

  Fly   983 GKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATT 1047
            ..::|.|....: ..:.|.:::....|:.|.|.::.|.|..|.....:|.....|...|.|....
plant  1110 SPERMKRFAVGR-TRFMITSLRTYFTRIVVGDCRDGVLFYSYHEESKKLHQIYCDPAQRLVADCF 1173

  Fly  1048 LLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENI---CSFHVGE 1109
            |:|.:::|::|:.|:::|....       |....|.|.|       ..|....|:   |::::||
plant  1174 LMDANSVAVSDRKGSIAILSCK-------DHSDFGMKHL-------EYSSPESNLNLNCAYYMGE 1224

  Fly  1110 IIMSLQK------------------ATLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE- 1155
            |.||::|                  :..|....:.:|..||.|::..|.|.:| |:|:..:.::
plant  1225 IAMSIKKGCNIYKLPADDVLRSYGLSKSIDTADDTIIAGTLLGSIFVFAPISS-EEYELLEGVQA 1288

  Fly  1156 -MHMRNENPPLCGRDHLSYRSSYYP--VKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTP------ 1211
             :.:.....|:.|.||..:|....|  .:.:||||:..|:|.:...:|:|:......:|
plant  1289 KLGIHPLTAPVLGNDHNEFRGRENPSQARKILDGDMLAQFLELTNRQQESVLSTPQPSPSTSKAS 1353

  Fly  1212 -----------NQICKKLEDIRTRYA 1226
                       :|:.:.||  |..||
plant  1354 SKQRSFPPLMLHQVVQLLE--RVHYA 1377

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sf3b3	NP_728546.1	MMS1_N	76..592	CDD:402179	133/650 (20%)
		CPSF_A	872..1194	CDD:397339	87/418 (21%)
AT3G11960	NP_001327782.1	MMS1_N	116..674	CDD:402179	129/627 (21%)
		CPSF_A	<1069..1330	CDD:397339	61/276 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1898
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10644
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	4	3.870