Sequence 1: | NP_728546.1 | Gene: | Sf3b3 / 38093 | FlyBaseID: | FBgn0035162 | Length: | 1227 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_995833.1 | Gene: | Cpsf160 / 44250 | FlyBaseID: | FBgn0024698 | Length: | 1455 | Species: | Drosophila melanogaster |
Alignment Length: | 1557 | Identity: | 288/1557 - (18%) |
---|---|---|---|
Similarity: | 544/1557 - (34%) | Gaps: | 482/1557 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 ATGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTG------------------KVHTLLSTE 57
Fly 58 IFGCVRALMAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPGQYFA 122
Fly 123 ----IDPKGRAVMIGAVEKQKLAYIMNRDT---QARLTISSPLE----AHKSNT--LTYHMVG-- 172
Fly 173 -VDVGFDNPMFACLEIDYEEADMDPSGDAAQRTQQTLTFYE------------------LDLGLN 218
Fly 219 HVVRKYSEPLEEHANFL---------VSVPGGNDGPSGVLICSENYLTYKN---------LGDQH 265
Fly 266 DIRCPIPRRRNDLDDPERGM-IFICSATHRTKSMYFFLLQTEQGDIFKITLETDDDVVSEIKLKY 329
Fly 330 FDTVPPA---TAMCVLKTGFLFVASEFGNHYL----------------------YQIAHLGDDDD 369
Fly 370 E-------------PEFSSAMPLEEGETFFFAPRALKNLV--------LVDELPSFAPI------ 407
Fly 408 ---------IT-----SQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNA 458
Fly 459 VWTV------KKRADDEFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDA-L 516
Fly 517 VQVYPDGIRHIR------------------------SDKRV--------------NEWKAPGKKS 543
Fly 544 ITKCAVNQRQVVITLSG--------------------------------------------RELV 564
Fly 565 Y------FEMDPTGELNEYTER--SEMPAEIMCMALGTVPEGEQRSWFLAVGLADNTVRILSL-- 619
Fly 620 --------DPNN---CLTPCSMQALPSPAESLCLVEMGHTESTTQGGLDDDAPAQRSGNNKGTIY 673
Fly 674 LN-IGLS-NG----VLLRT----------------------------VLD--PVSGDLADT---- 698
Fly 699 -------RTRYLGS-RPVKLFRIKMQGSEAVLAMSSR---TWLSYYHQNRFHLTPLSYETLEYAS 752
Fly 753 GFSSEQCSEGIVAISTN-TLRILALE---KLGAVFNQVAFPLQYTPRTFVIHPDTGRM--LIAET 811
Fly 812 DHNAYTEDTKSARKEQMAEEMRSAAGDEERELARE-MANAFINEVLP--EDVFSSPKAGLGLWAS 873
Fly 874 QIRCLDAMHGQTMFSVPLTQNEAIMSMAMLKFSIAADG-----RYYLAVGIAKDLQLNPRISQGG 933
Fly 934 CIDIYKI-----DPTCSSLEFMHRTDIDEI--------PGALCGFQGRLLAGCGRMLRIYDFGKK 985
Fly 986 KMLRKC---ENKHIPYQIVNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATT 1047
Fly 1048 -LLDYDTIA--IADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGE 1109
Fly 1110 IIMSL-----------QKATLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENP 1163
Fly 1164 PLCGRDHLSYRS-------SYYPVKNVLDGDLCEQYLSI------EAAKQ-----KSIAGDM 1207 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sf3b3 | NP_728546.1 | MMS1_N | 76..592 | CDD:402179 | 126/731 (17%) |
CPSF_A | 872..1194 | CDD:397339 | 70/363 (19%) | ||
Cpsf160 | NP_995833.1 | SFT1 | 1..1453 | CDD:227490 | 288/1557 (18%) |
MMS1_N | 94..674 | CDD:287414 | 115/616 (19%) | ||
CPSF_A | 1086..1419 | CDD:281209 | 74/377 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45472753 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR10644 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |