Protein Alignment Sf3b3 and Sf3b3

DIOPT Version :9

• Sequence 1: NP_728546.1
• Gene: Sf3b3 / 38093
• FlyBaseID: FBgn0035162
• Length: 1227
• Species: Drosophila melanogaster
• Sequence 2: NP_001099657.2
• Gene: Sf3b3 / 292019
• RGDID: 1311636
• Length: 1217
• Species: Rattus norvegicus
• Alignment Length: 1227
• Identity: 921/1227 - (75%)
• Similarity: 1065/1227 - (86%)
• Gaps: 10/1227 - (0%)

  Fly     1 MYLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFGCVRAL 65
            |:|||||||:|||::.|:||||||.||||:::||||.|||||||.|||||||||:.|:||.:|:|
  Rat     1 MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSL 65

  Fly    66 MAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPGQYFAIDPKGRAV 130
            |||||||||||||||||||||||||||.||||..||:|||||||||||||||||:.|:|||||||
  Rat    66 MAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRAV 130

  Fly   131 MIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNPMFACLEIDYEEADMD 195
            ||.|:|||||.||:|||..|||||||||||||:|||.||:|||||||:||||||||:||||||.|
  Rat   131 MISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMFACLEMDYEEADND 195

  Fly   196 PSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPGGNDGPSGVLICSENYLTYKN 260
            |:|:||..||||||||||||||||||||||||||||.|||::||||:|||||||||||||:||||
  Rat   196 PTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGSDGPSGVLICSENYITYKN 260

  Fly   261 LGDQHDIRCPIPRRRNDLDDPERGMIFICSATHRTKSMYFFLLQTEQGDIFKITLETDDDVVSEI 325
            .|||.||||||||||||||||||||||:|||||:||||:|||.|||||||||||||||:|:|:||
  Rat   261 FGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFFFLAQTEQGDIFKITLETDEDMVTEI 325

  Fly   326 KLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPR 390
            :||||||||.|.|||||||||||||||||||||||||||||||:|||||||||||||:||||.||
  Rat   326 RLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPR 390

  Fly   391 ALKNLVLVDELPSFAPIITSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGN 455
            .||||||||||.|.:||:..|:|||||||||||||.|||||||:|||||||||||||||||||||
  Rat   391 PLKNLVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGN 455

  Fly   456 PNAVWTVKKRADDEFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVY 520
            |||||||::..:|||||||||||||||||||||||||||||||||||||||.|:.||||||||||
  Rat   456 PNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVY 520

  Fly   521 PDGIRHIRSDKRVNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPA 585
            ||||||||:||||||||.||||:|.|||||||||||.|:|.|||||||||:|:|||||||.||.|
  Rat   521 PDGIRHIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSA 585

  Fly   586 EIMCMALGTVPEGEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTES 650
            :::||:|..||.|||||.||||||.||||||:||||::||.|.||||||:..||||:||||.||.
  Rat   586 DVVCMSLANVPPGEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEK 650

  Fly   651 TTQGGLDDDAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKM 715
            ..:.|         ...:.|.:||||||.||||||||||||:|||:||||||||||||||||::|
  Rat   651 QDELG---------ERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRM 706

  Fly   716 QGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLG 780
            ||.|||||||||:||||.:|:|||||||||||||:||||:||||.||||||||||||||||||||
  Rat   707 QGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771

  Fly   781 AVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQMAEEMRSAAGDEERELAR 845
            |||||||||||||||.|||||::..::|.|||||||||.||:.||:||||||..|||::|||||.
  Rat   772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAA 836

  Fly   846 EMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNEAIMSMAMLKFSIAAD 910
            |||.||:||.|||.:|.:||||.|.|||.||.::.:.|.|:..|.|.||||..|:|:.:||...:
  Rat   837 EMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGE 901

  Fly   911 GRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSSLEFMHRTDIDEIPGALCGFQGRLLAGCGR 975
            . :|:.||:||||.|:||...||.:..||:......|||:|:|.::|:|.|:..||||:|.|.|:
  Rat   902 D-WYVLVGVAKDLILSPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGK 965

  Fly   976 MLRIYDFGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHP 1040
            :||:||.||||:|||||||||...|..||.:||||.|||||||..::||:|.|||||||||||:|
  Rat   966 LLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYP 1030

  Fly  1041 RWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSF 1105
            ||||..:||||||:|.||||||:.:.|||.:..|:|||||||.|:|||||||:|||||:|.|.::
  Rat  1031 RWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNY 1095

  Fly  1106 HVGEIIMSLQKATLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDH 1170
            ||||.::||||.||||||||:|:|.||||.:|..|||||.||:|||||:|||:|:|:||||||||
  Rat  1096 HVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDH 1160

  Fly  1171 LSYRSSYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDIRTRYAF 1227
            ||:||.|:|||||:|||||||:.|:|..|||:::.::.|||.::.||||||||||||
  Rat  1161 LSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDIRTRYAF 1217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sf3b3	NP_728546.1	MMS1_N	76..592	CDD:402179	440/515 (85%)
		CPSF_A	872..1194	CDD:397339	199/321 (62%)
Sf3b3	NP_001099657.2	MMS1_N	76..592	CDD:402179	440/515 (85%)
		CPSF_A	863..1182	CDD:397339	195/318 (61%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166354228
Domainoid	1	1.000	915	1.000	Domainoid score	I41
eggNOG	1	0.900	-	-		E1_KOG1898
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H6579
Inparanoid	1	1.050	1896	1.000	Inparanoid score	I51
OMA	1	1.010	-	-		QHG54483
OrthoDB	1	1.010	-	-		D57158at33208
OrthoFinder	1	1.000	-	-		FOG0004388
OrthoInspector	1	1.000	-	-		oto96117
orthoMCL	1	0.900	-	-		OOG6_102496
Panther	1	1.100	-	-	LDO	PTHR10644
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X3106
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	16	15.770