DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sf3b3 and cft1

DIOPT Version :9

Sequence 1:NP_728546.1 Gene:Sf3b3 / 38093 FlyBaseID:FBgn0035162 Length:1227 Species:Drosophila melanogaster
Sequence 2:NP_595441.1 Gene:cft1 / 2539694 PomBaseID:SPBC1709.08 Length:1441 Species:Schizosaccharomyces pombe


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sf3b3NP_728546.1 MMS1_N 76..592 CDD:402179
CPSF_A 872..1194 CDD:397339
cft1NP_595441.1 SFT1 1..1441 CDD:227490
MMS1_N 119..712 CDD:287414
CPSF_A 1075..1406 CDD:281209
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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