Sequence 1: | NP_728546.1 | Gene: | Sf3b3 / 38093 | FlyBaseID: | FBgn0035162 | Length: | 1227 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491953.1 | Gene: | teg-4 / 172406 | WormBaseID: | WBGene00019323 | Length: | 1220 | Species: | Caenorhabditis elegans |
Alignment Length: | 1241 | Identity: | 708/1241 - (57%) |
---|---|---|---|
Similarity: | 912/1241 - (73%) | Gaps: | 35/1241 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MYLYNLTLQKATGVTHAVHGNFSG-GKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFGCVRA 64
Fly 65 LMAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPGQYFAIDPKGRA 129
Fly 130 VMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNPMFACLEIDYEEADM 194
Fly 195 DPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPGGNDGPSGVLICSENYLTYK 259
Fly 260 NLGDQHDIRCPIPRRRNDLDDPERGMIFICSATHRTKSMYFFLLQTEQGDIFKITLETDDDVVSE 324
Fly 325 IKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAP 389
Fly 390 RALKNLVLVDELPSFAPIITSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPG 454
Fly 455 NPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQV 519
Fly 520 YPDGIRHIRSDKRVNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMP 584
Fly 585 AEIMCMALGTVPEGEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTE 649
Fly 650 STTQGGLDDDAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIK 714
Fly 715 MQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKL 779
Fly 780 GAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQMAEEMRSAAGDE-EREL 843
Fly 844 AREMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNEAIMSMAMLKFSIA 908
Fly 909 ADGRYYLAVGIA------------KDLQLNPRISQGGCIDIYKIDPTCSSLEFMHRTDIDEIPGA 961
Fly 962 LCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVFFIRYRR 1026
Fly 1027 AENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGL 1091
Fly 1092 LSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEM 1156
Fly 1157 HMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1221
Fly 1222 RTRYAF 1227 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sf3b3 | NP_728546.1 | MMS1_N | 76..592 | CDD:402179 | 354/515 (69%) |
CPSF_A | 872..1194 | CDD:397339 | 159/333 (48%) | ||
teg-4 | NP_491953.1 | MMS1_N | 77..591 | CDD:371047 | 353/514 (69%) |
CPSF_A | 857..1185 | CDD:367377 | 158/331 (48%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160167655 | |
Domainoid | 1 | 1.000 | 745 | 1.000 | Domainoid score | I36 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1898 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H6579 | |
Inparanoid | 1 | 1.050 | 1430 | 1.000 | Inparanoid score | I50 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1325 |
OMA | 1 | 1.010 | - | - | QHG54483 | |
OrthoDB | 1 | 1.010 | - | - | D57158at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004388 | |
OrthoInspector | 1 | 1.000 | - | - | oto17890 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102496 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10644 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1253 |
SonicParanoid | 1 | 1.000 | - | - | X3106 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
17 | 16.750 |