DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13898 and cmlc1

DIOPT Version :9

Sequence 1:NP_612058.1 Gene:CG13898 / 38092 FlyBaseID:FBgn0035161 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_571767.2 Gene:cmlc1 / 64671 ZFINID:ZDB-GENE-030522-1 Length:196 Species:Danio rerio


Alignment Length:144 Identity:42/144 - (29%)
Similarity:70/144 - (48%) Gaps:13/144 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DDLQDICEAFELCDPEKTG--RIRADDLGEVMRTLGQNHTESEIYRY-----SEGLEGDVNGYIQ 68
            |.:::..:||.|.|...||  :||....|:|||.||.|.|.:::...     :|.:.   ..|:.
Zfish    50 DQIEEFRDAFTLFDETPTGEMKIRYAQCGDVMRALGHNPTNADVLTVLGKPKAEEMN---TKYLD 111

  Fly    69 LTDFIDLMTKIYSA--MGSSDYLKAAYNAFDFDKDGLVTYGELRHVFINLGEKISDEEFNEVFRQ 131
            ...|:.::..|..|  .|:.:........||.:.:|.|...|||||...||||::::|.:.:...
Zfish   112 FETFLPMLQHISRAKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEDEVDRLMAG 176

  Fly   132 ADVDGDGVINFRDF 145
            .: |.:|.||:..|
Zfish   177 QE-DANGCINYTSF 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13898NP_612058.1 PTZ00184 8..146 CDD:185504 42/144 (29%)
EFh 18..77 CDD:298682 19/65 (29%)
EFh 88..148 CDD:238008 19/58 (33%)
cmlc1NP_571767.2 EFh_PEF 48..195 CDD:330173 42/144 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1470794at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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