DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13898 and Calm2

DIOPT Version :10

Sequence 1:NP_612058.1 Gene:CG13898 / 38092 FlyBaseID:FBgn0035161 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_059022.1 Gene:Calm2 / 50663 RGDID:2258 Length:149 Species:Rattus norvegicus


Alignment Length:138 Identity:55/138 - (39%)
Similarity:85/138 - (61%) Gaps:0/138 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LANDDLQDICEAFELCDPEKTGRIRADDLGEVMRTLGQNHTESEIYRYSEGLEGDVNGYIQLTDF 72
            |..:.:.:..|||.|.|.:..|.|...:||.|||:||||.||:|:......::.|.||.|...:|
  Rat     5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69

  Fly    73 IDLMTKIYSAMGSSDYLKAAYNAFDFDKDGLVTYGELRHVFINLGEKISDEEFNEVFRQADVDGD 137
            :.:|.:......|.:.::.|:..||.|.:|.::..|||||..|||||::|||.:|:.|:||:|||
  Rat    70 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 134

  Fly   138 GVINFRDF 145
            |.:|:.:|
  Rat   135 GQVNYEEF 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13898NP_612058.1 PTZ00184 8..146 CDD:185504 55/138 (40%)
Calm2NP_059022.1 PTZ00184 1..149 CDD:185504 55/138 (40%)
Necessary and sufficient for interaction with PCP4. /evidence=ECO:0000250|UniProtKB:P0DP24 77..149 29/66 (44%)

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