DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13898 and cabp1a

DIOPT Version :10

Sequence 1:NP_612058.1 Gene:CG13898 / 38092 FlyBaseID:FBgn0035161 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001315294.1 Gene:cabp1a / 449789 ZFINID:ZDB-GENE-041010-36 Length:379 Species:Danio rerio


Alignment Length:148 Identity:44/148 - (29%)
Similarity:82/148 - (55%) Gaps:7/148 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QDYILANDDLQDICEAFELCDPEKTGRIRADDLGEVMRTLGQNHTESEIYRYSEGLEGDVNGYIQ 68
            |:..|..:::.::.:||:..|.:|.|.|...|||..|||:|...||.|:...|:.:..::.|::.
Zfish   227 QNRELRPEEIDELRDAFKEFDKDKDGFISCKDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVD 291

  Fly    69 LTDFIDLM-----TKIYSAMGSSDYLKAAYNAFDFDKDGLVTYGELRHVFIN-LGEKISDEEFNE 127
            ..||::||     .:....:|..: |:.|:..||.:.||.::.||||..... ||:::...:..:
Zfish   292 FEDFVELMGPKLLAETADMIGIKE-LRNAFKEFDTNGDGEISTGELREAMRKLLGQQVGHRDLED 355

  Fly   128 VFRQADVDGDGVINFRDF 145
            :.|..|::|||.::|.:|
Zfish   356 ILRDIDLNGDGRVDFEEF 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13898NP_612058.1 PTZ00184 8..146 CDD:185504 43/144 (30%)
cabp1aNP_001315294.1 PTZ00184 230..377 CDD:185504 43/145 (30%)

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