DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13898 and tnnc1

DIOPT Version :10

Sequence 1:NP_612058.1 Gene:CG13898 / 38092 FlyBaseID:FBgn0035161 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001004776.1 Gene:tnnc1 / 447990 XenbaseID:XB-GENE-480515 Length:161 Species:Xenopus tropicalis


Alignment Length:142 Identity:39/142 - (27%)
Similarity:71/142 - (50%) Gaps:4/142 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LANDDLQDICEAFEL-CDPEKTGRIRADDLGEVMRTLGQNHTESEIYRYSEGLEGDVNGYIQLTD 71
            |..:...:...||:: ....:.|.|...:||:|||.||||.|..|:....:.::.|.:|.:...:
 Frog    12 LTEEQKNEFRAAFDIFVQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76

  Fly    72 FIDLMTKIY---SAMGSSDYLKAAYNAFDFDKDGLVTYGELRHVFINLGEKISDEEFNEVFRQAD 133
            |:.:|.:..   |...|.:.|...:..||.:.||.:...||:.:....||.|::::..|:.|..|
 Frog    77 FLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKMMLEATGETITEDDIEELMRDGD 141

  Fly   134 VDGDGVINFRDF 145
            .:.||.|::.:|
 Frog   142 KNNDGRIDYDEF 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13898NP_612058.1 PTZ00184 8..146 CDD:185504 39/142 (27%)
tnnc1NP_001004776.1 PTZ00184 9..157 CDD:185504 39/142 (27%)

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