DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13898 and myl13

DIOPT Version :9

Sequence 1:NP_612058.1 Gene:CG13898 / 38092 FlyBaseID:FBgn0035161 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_956810.1 Gene:myl13 / 393488 ZFINID:ZDB-GENE-040426-1593 Length:186 Species:Danio rerio


Alignment Length:142 Identity:40/142 - (28%)
Similarity:70/142 - (49%) Gaps:9/142 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DDLQDICEAFELCD--PEKTGRIRADDLGEVMRTLGQNHTESEIYRYSEGLEGDVNGYIQLTD-- 71
            :.::|..:||:|.|  |....:|.....|:::|.||||.|.:|:. :..|.....:..:::.|  
Zfish    40 EQIEDFKDAFQLFDRTPTNEMKITFAQCGDLIRALGQNPTNAEVL-HVLGKPKPEDMQVKMLDFD 103

  Fly    72 -FIDLMTKIYSA--MGSSDYLKAAYNAFDFDKDGLVTYGELRHVFINLGEKISDEEFNEVFRQAD 133
             |:.:...|..|  .|:.:........||.:.:|.|...|||||...||||:.::|..::....:
Zfish   104 QFLPMHQHICKAKDRGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEDEVEQLMAGQE 168

  Fly   134 VDGDGVINFRDF 145
             |.:|.||:..|
Zfish   169 -DANGCINYEAF 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13898NP_612058.1 PTZ00184 8..146 CDD:185504 40/142 (28%)
EFh 18..77 CDD:298682 17/63 (27%)
EFh 88..148 CDD:238008 19/58 (33%)
myl13NP_956810.1 PTZ00184 34..185 CDD:185504 40/142 (28%)
EFh 123..184 CDD:238008 19/58 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1470794at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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