DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13898 and RGD1559821

DIOPT Version :9

Sequence 1:NP_612058.1 Gene:CG13898 / 38092 FlyBaseID:FBgn0035161 Length:151 Species:Drosophila melanogaster
Sequence 2:XP_006249352.1 Gene:RGD1559821 / 304447 RGDID:1559821 Length:151 Species:Rattus norvegicus


Alignment Length:143 Identity:42/143 - (29%)
Similarity:71/143 - (49%) Gaps:15/143 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DDLQDICEAFELCDPEKTGRIRADDLGEVMRTLGQNHTESEIYRYSEGLEGD-VNGYIQLTDFID 74
            |...:..|||:|.|....|:|.....|:|||.||||.|.:|:.:.....:.| :|  :::.||..
  Rat     7 DQTTEFKEAFQLFDRTGNGKILYSQCGDVMRALGQNPTNTEVLKVLGNPKSDEMN--VEVLDFEH 69

  Fly    75 LMTKIYSAMGS------SDYLKAAYNAFDFDKDG--LVTYGELRHVFINLGEKISDEEFNEVFRQ 131
            .:..:.:...|      .||::..:   .|||:|  .|...|:||:.:.|||.:::||. |:...
  Rat    70 FLPMLQTVAKSKDQGTYEDYVEGLH---VFDKEGNSAVLGAEIRHILVTLGENMTEEEV-EMLVA 130

  Fly   132 ADVDGDGVINFRD 144
            ...|.:..||:.:
  Rat   131 GHEDSNSCINYEE 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13898NP_612058.1 PTZ00184 8..146 CDD:185504 42/143 (29%)
EFh 18..77 CDD:298682 21/59 (36%)
EFh 88..148 CDD:238008 18/59 (31%)
RGD1559821XP_006249352.1 PTZ00184 5..149 CDD:185504 42/143 (29%)
EFh 11..75 CDD:298682 21/65 (32%)
EFh 11..39 CDD:197492 11/27 (41%)
EFh 94..148 CDD:298682 17/54 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1470794at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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