DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13898 and mlc-3

DIOPT Version :9

Sequence 1:NP_612058.1 Gene:CG13898 / 38092 FlyBaseID:FBgn0035161 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_741145.1 Gene:mlc-3 / 175768 WormBaseID:WBGene00003371 Length:153 Species:Caenorhabditis elegans


Alignment Length:137 Identity:38/137 - (27%)
Similarity:70/137 - (51%) Gaps:7/137 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QDIC-EAFELCDPEKTGRIRADDLGEVMRTLGQNHTESEIYRYSEGLEGDVNGYIQLT--DFIDL 75
            ||:. |.|.|.|.|..|:|....:|:|.|..|...|::.:.: :.|.|....|..:||  :::.:
 Worm     6 QDVLKEIFNLYDEELDGKIDGTQVGDVARAAGLKPTQAMVTK-AAGQEFKRKGEKRLTFEEWLPM 69

  Fly    76 MTKIYSAMGSSDY--LKAAYNAFDFDKDGLVTYGELRHVFINLGEKISDEEFNEVFRQADVDGDG 138
            ..::........|  .......||.::.|.:...||||:.:.|||::|.:|.:|:.:..: ||:|
 Worm    70 YEQLAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELLKGVE-DGEG 133

  Fly   139 VINFRDF 145
            ::.:.||
 Worm   134 MVKYEDF 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13898NP_612058.1 PTZ00184 8..146 CDD:185504 38/137 (28%)
EFh 18..77 CDD:298682 17/60 (28%)
EFh 88..148 CDD:238008 19/60 (32%)
mlc-3NP_741145.1 EF-hand_7 9..70 CDD:290234 17/61 (28%)
EFh 90..142 CDD:298682 18/52 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1470794at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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